Sediminicurvatus halobius: LMH63_10810
Help
Entry
LMH63_10810 CDS
T09389
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
shai
Sediminicurvatus halobius
Pathway
shai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMH63_10810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shai03019
]
LMH63_10810
Enzymes [BR:
shai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMH63_10810
Messenger RNA biogenesis [BR:
shai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMH63_10810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UEX76452
LinkDB
All DBs
Position
2373039..2374250
Genome browser
AA seq
403 aa
AA seq
DB search
MSFDKLGLSAELLRAVREQGYTTPTPIQSRAIPAVLSGGDVMGAAQTGTGKTAGFTLPLL
QRLTDNPRAGGQRSVRALVVTPTRELCAQVQESVRTYGRHLPLRSATVFGGVGMQPQVDA
LRRGVDVLVATPGRLLDHLRQRTVDLSAVEILVLDEADRMLDMGFIHDIRKLLAALPPRR
QTLLFSATFSPEIRRLADGLLHDPVRIEVAARNTAAETVAQKVHPVSRGGKRGLLSNLIR
EGDWEQVLVFTRTKHGANRLAKQLEGDGLVAAAIHGNKSQGARTRALAGFKQGDVRVLVA
TDIAARGLDIEELPHVVNFELPNVPEDYVHRIGRTGRAGRGGQAVSLVCVDEISLLRGIE
RLLGNPIEQELVPGFEPDPNERPEPIVKAPQGRRGGGRRARPR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgataaactcggcctctcggccgaactgctgcgcgccgtgcgcgagcagggc
tacacgacgcccaccccgatccagtcccgcgccattccggctgtcctcagcggcggcgat
gtcatgggcgccgcccagaccggaaccggcaagaccgcaggctttaccctgccgctgctg
cagcggctgacggacaacccgcgcgccggcggccagcgctcggtgcgcgcgctggtggtg
acgcccacccgcgagctctgcgcccaggtgcaggagagcgtgcgtacctatggccggcat
ctgccgctgcgctcggcgaccgtgttcggcggcgtcggcatgcagccgcaggtggacgcc
ctgcggcgcggcgtggatgtgctggtggcgacgcccgggcgcctgctcgaccacctccgc
cagcgcaccgtggacctttccgccgtcgagatcctggtcctggacgaggcggatcggatg
ctcgacatgggctttatccacgacatccgcaagctgctcgcggcactgccgccacggcgg
cagacgctgctgttctcggccacgttctcgccggagatccggcgcctcgcggatggactg
ctgcacgatccggtgcggatcgaggtggcggcgcgaaacaccgccgccgagacggtggcg
cagaaggttcacccggtcagccggggcggcaagcgcggcctgctgagcaaccttatccgc
gagggcgactgggagcaggtgctggtgttcacacgcaccaagcacggcgccaaccgtctc
gcaaagcagctggagggcgacggtctggtggccgcggcgatccacggcaacaagagtcag
ggagcccggacgcgggcgctggcgggcttcaagcagggcgacgtgcgcgttctggtggcg
acggacatcgccgcccgcggactggatatcgaggagctgccccacgtggtgaacttcgag
ctgccgaacgtcccggaggactatgtgcaccggatcggccgcacggggcgtgcggggcgc
ggtggccaggcggtgtcgctggtctgcgtggacgagatcagcctgctgcggggcatcgag
cggctgcttggcaaccccatcgagcaggagctggtgccggggttcgagccggacccgaac
gagcgtccggagccaatcgtcaaggcgccgcaggggcgtcgcggcggcgggcggcgagcg
aggccgcggtag
DBGET
integrated database retrieval system
