KEGG   Sediminicurvatus halobius: LMH63_11890
Entry
LMH63_11890       CDS       T09389                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
shai  Sediminicurvatus halobius
Pathway
shai03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shai00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LMH63_11890 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shai02044]
    LMH63_11890 (tssM)
Secretion system [BR:shai02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LMH63_11890 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical TM7S3_TM198 KNOX2
Other DBs
NCBI-ProteinID: UEX76655
LinkDB
Position
complement(2606374..2609868)
AA seq 1164 aa
MRRPTGVLRMTLFLCGLVLLALLIWFLGPYLAFADVRPLAGVTGRAVAIATVTGILGGVA
LLRRQRTRRANRRLRSELVAGAPSDGAGEELRRRFEEAVRFLRESRKGGNLYELPWYVII
GPPGAGKTTALVNSGLSFPLSEKFGKASMRGVGGTRNCDWWFTDEAVLLDTAGRYLSQDT
DPGADSSEWRRFLELLARYRKRRPLNGVIVTLSADDLLTMTARTREQHVMAVRRRLDEVQ
RTLRIRFPVYLMITKCDLVAGFTEYFDDLDLEGRSQVWGITFPHPDTGGEAPADELGREY
PRLLARLNERVLQRLDQERDARRRALLFGFPRQMAGLEEALRDFVAEAFSHTAYDRPVML
RGVYLTSGTQEGTPIDRMMGTLARSFGLDAESSGEPQTGQGRSYFLRNLLRDVIFPESGL
AGVNWRLEVGRAVAQNVAYVSVLILAGLLVVAWATSYRYNREYLADVESTLEVHRERATM
PVPADAGLRDVLPRLDALREVADSAGRHRGDVPLLMGLGLYRGDAVGKVALDAYDQGLRQ
LLLPRIGLLLEARMRAARAEPKRLYGLLKAYIMLAEPEHQDPAALAAIVRAELARSFDDS
PPVARALALHFEALTGREPSPRISSPDTELIARARTALAQASIPVLMMSRLETVYDRDHG
HALRLDLEAGLGSEEIFRRSSGVPLSEPVPALYTRAGFEEITGDVGSEMVQAFLRESWVL
GEDVLPSGPTARFELSAEFLRHYEQAYIEFWEELLADLEVAPLLDVGQATDVLATLSGPT
SPLRQLLATVDRQTHFPEPDSGAAEEAASAARGGRLAGLLDFASEATRDVTGPRPGARIS
EHFRDLHRMVAGGESGTPPIDGVIALLGELYAQLDSMGSGLGQQDVMTVLSRSGARDALS
QLRVDAERAPGPVGEWLGELAGKGQEVALRSLRGELNQRYREQVASECRAVVEGRYPFET
NSQRDVPLSDFARLFGPGGAFDRFFQEHLAALVDTGAARWRWRTQDGVPIGIPDSVLEEF
QRARAIRDMFFAGGGAEPRLQLRLTPAYLDGRVRRFALTLDGQQLVYRHGPPRGETFTWP
GPDSGRVIAEFEDRGGQRPNVRFEGPWALFRALQASGLAAESETRFTATFEAGDYTARVR
VAFDTARNPLGRRDWMRFRCPGRL
NT seq 3495 nt   +upstreamnt  +downstreamnt
gtgagacggcccaccggcgtcctccgcatgaccctgttcctgtgcgggctggtgctgctc
gcgctcctgatctggttcctggggccctatctcgcgttcgccgacgtccggccgcttgcc
ggggtgaccgggcgcgccgtcgccatcgccaccgtgaccgggattctcggcggcgtggcg
ctgctgcgccggcagcgcacccgccgcgccaaccgacggctgcggtccgagctggtcgcg
ggtgcgccttcggacggcgccggtgaggagctgcggcggcggttcgaggaggcggtccgt
ttcctgcgcgagtcccgcaagggcggcaatctctacgagctgccgtggtacgtcatcatc
ggcccaccgggcgccggcaagaccacggcgctggtcaactccggactcagcttcccgctc
tcggagaagttcggcaaggcctcgatgcgtggcgtcggcggcacgcgcaactgtgactgg
tggttcaccgacgaggcggtcctgctcgataccgctggccgctacctcagccaggacacc
gacccgggtgctgacagctcggagtggcgtcgtttcctcgagctgctcgcacgctaccgc
aagcggcgcccgctcaacggagtgatcgtcaccctcagcgcggacgacctgctcaccatg
accgcccggacccgcgagcagcacgtgatggcggtccgccggcgcctggacgaggtgcaa
cgcaccctgcgcattcgcttcccggtctacctcatgatcaccaaatgcgatctggtggcc
gggttcaccgagtatttcgacgatctcgacctggagggccggtcgcaggtctggggcatc
accttcccccatccggacaccgggggcgaggcgccggcggacgagctcggccgggagtac
ccgcggctgctggcgcggctgaacgagcgcgtgctgcagcgcctcgaccaggagcgggac
gcccggcgccgggcgctgctgttcggctttccccggcagatggcggggctggaggaggcg
ctgcgggacttcgtcgccgaggcattctcgcacacggcctacgaccgtccggtcatgctg
cggggtgtgtacttgaccagcggcacccaggaggggacgcccatcgaccggatgatgggc
acgctggcccgctccttcggcctcgacgcggaatcgtccggggagccgcagaccggccag
ggcagaagctacttcctccgcaacctgctgcgcgacgtgatctttccggaaagcggcctg
gccggtgtgaactggcgcctggaggtcggccgcgccgtggcgcagaacgttgcctatgtg
tccgtcctgatcctcgccggcctgctggtggtcgcctgggcgacgagctaccgctacaac
cgtgagtaccttgcggacgtggagagcacgctcgaggttcaccgggaacgggctaccatg
ccggtgccggcggacgcgggattgcgggacgtgctgccgcgtctcgatgccctgcgcgag
gtggcggactcggctggccgccaccgcggcgacgtgccgctgctcatgggcctcggcctc
tatcgcggcgacgccgtcgggaaagtcgccctcgacgcctatgaccagggtctgcggcag
ctgctgctgccgcggatcgggctgctgctcgaggcgcgcatgcgcgcggcacgcgcggag
ccgaaacgcctgtacggcctgctcaaggcgtacatcatgctggccgagccggagcatcag
gatcccgcggcgctcgcggccatcgtgcgcgcggagctggcgcgttccttcgatgacagc
ccgccggttgcgcgggcgctggcgctgcacttcgaggcgctcaccgggcgcgagccgtcg
ccgcgcatctcctcgccggacacggagctgatcgcgcgggcgcgcacggcgctggcgcag
gcgtcgatcccggtgctgatgatgagccgcctggagacggtctacgatcgcgaccacggg
cacgcgctgcgcctcgacctggaggcagggctcggcagcgaggagatcttccggcgcagc
agcggcgtgccgctgagcgagccggtccccgccctctacacacgcgccgggttcgaggag
atcaccggcgatgtgggcagcgagatggtgcaggctttcctccgggagagctgggtgctc
ggcgaagatgtcctgcccagcgggccgaccgctcgcttcgagctctccgccgagttcctg
cggcactacgagcaggcctatatcgaattctgggaggaactgctcgcggacctggaagtg
gcacccctgctcgacgtgggccaggcaacggacgttctggcgacgctgagcgggccgaca
tccccgctccggcagctcctggcgacggtggaccggcagacgcacttcccggagccggac
tccggcgcggcggaggaggcggcgtccgccgcccgcggcgggcgtctggcgggcctgctc
gatttcgcgagcgaggcgacccgcgacgtcaccgggccgcgcccgggcgccaggatcagc
gagcatttccgggatctgcaccggatggtcgccggcggggagtcgggtacgcctcccatc
gacggcgtgatcgccctgctgggcgagctctatgcgcagctcgattccatgggctcgggt
ctcgggcagcaggacgtgatgacggtgctcagccgctcgggagcgcgggacgcgctgagc
cagctgcgtgtcgacgcagagcgtgcgccggggccggtgggcgaatggctcggcgagctg
gcgggcaaggggcaggaggtcgcgctgcgcagcctgcgcggcgagctgaatcagcgctac
cgggaacaggtggcaagcgagtgccgggcggtggtcgaggggcgctacccgttcgagacc
aacagtcagcgcgacgtgcccctgagtgattttgcgcggctgttcgggcccggcggcgcc
ttcgaccgcttcttccaggagcacctggcagcgctggtggacaccggagcagcccgctgg
cgctggcgcacgcaggacggcgtgcccatcggcatcccggactcggtgctggaggagttc
cagcgcgcacgggcgattcgcgacatgttcttcgcgggcggcggggcggagccgcgtctg
cagctccggctgaccccggcctacctcgacgggcgggtccgccggttcgccctcacgctg
gacgggcagcagctggtgtaccgtcatggcccgccccgcggcgagacattcacctggccc
ggtccggacagtggccgggtgatcgcggagttcgaggatcgcggcgggcaacggccgaac
gtgcgcttcgaagggccatgggcgctgttccgcgcgctccaggcttcgggactcgccgcg
gagtcggagacgcgtttcacggccaccttcgaggccggtgactacaccgcccgggtgcgg
gtcgccttcgacaccgcgcgcaaccccctcgggcggagggactggatgcgctttcgctgc
ccggggaggctgtga

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