KEGG   Sediminicurvatus halobius: LMH63_11920
Entry
LMH63_11920       CDS       T09389                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
shai  Sediminicurvatus halobius
Pathway
shai03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shai00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LMH63_11920 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shai02044]
    LMH63_11920 (tssH)
Secretion system [BR:shai02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LMH63_11920 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 Sigma54_activat nSTAND3 AAA_25 Zeta_toxin AAA_7 ATPase_2 AAA_14 NACHT AAA_18 AAA_24 CbiA Hpr_kinase_C T2SSE NolB SRP54 Cyclin_N NBD_SMAX1 AAA_6
Other DBs
NCBI-ProteinID: UEX76661
LinkDB
Position
complement(2615049..2617823)
AA seq 924 aa
MAEISRAALFGKLDSLAYQAIDSATVFCRMRGNPYVELAHWLNQILQLQDSDLHRVVGRF
ELDPSRLARDITRSLDSLPRGASSVSDLSSHVEDAVERAWVWASLRFGDSSVRTGHLLVG
LLKSPGLRSLLPAISAEFGRIRVDQLIEEWDDILGDSPEAAQAASDGTRIGQDAAAAGGE
PAEAARGGPAGRQEALQRFTIDLTEQARAGRIDPVVGRDEEIRQMIDILMRRRQNNPILT
GEAGVGKTAVAEGFARRIATGDVPPPLREVSLRALDVGLLQAGASVKGEFENRLRQVIDE
VQGSERPIILFIDEAHTLIGAGGAAGTGDAANLLKPALARGTLRTIGATTWTEYKKYIEK
DPALSRRFQAVQVQEPDEERAAAMIRSMASALEQHHRVQLRDEALTAAVRLSSRYIPARQ
LPDKAVSLLDTACARVAVSQHGVPAEVEDSRRRIEALETELEIIGREQTVGMDTGDREPG
LRQAVAEERERLAGLEEAWQREKSVVDRILELRAALRERAGSAAAADEAAAAGSGDAPSP
AAGGDDTGVAGEESGGQQTPETTEGMVARLRELQAELEDLQGERPLILPSVDAQAVASVV
ADWTGIPVGRMVRDEIAAVLSLSERLSERVKGQDHALAMIARRVQTARANLDNPGKPVGV
FMLAGPSGVGKTETALALAETLYGGEHNVITINMSEFQEAHTVSTLKGAPPGYVGYGEGG
VLTEAVRRRPYSVVLLDEVEKAHPDVHEIFFQVFDKGWMEDGEGRLIDFKNTLIILTTNV
GTELIMRACGDGQQRPDAAELTRALREPLLRVFPPALLGRIVTVPYYPLGDDMLRDIIRL
QLDRIAARVQDNHEVPFSYEEAVVDQVLARCTELESGGRMIDAILTNSLLPDLSREFLGR
LIDHRPIRRVHVDVTDAEFTYAFE
NT seq 2775 nt   +upstreamnt  +downstreamnt
gtggcggagatcagtcgcgcggcgctgttcgggaagctggatagcctcgcctaccaggca
atcgacagcgccaccgtattctgccggatgcgggggaatccctacgtcgagctggcgcac
tggctcaaccagattctccagctccaggattccgacctccaccgtgtggtggggcgcttc
gagctcgatccgtcccggctggcccgtgatatcacgcgcagcctggactccctgccacgg
ggggcgagctcggtctcggacctctcctcgcacgtggaggacgcggtggagcgcgcctgg
gtctgggcttcgctgcgcttcggcgactcgagcgtgcgcaccggacacctgctcgttggc
ctgctcaagagtcccgggctgcgcagcctgctgccggcgatctccgcggagttcggcagg
atccgcgtcgatcagctgatcgaggagtgggacgacattctcggagactcgccggaggcc
gcccaggcggcgagcgacggcacccgcatcggccaggacgcggcggccgccggcggcgag
cctgcggaagcggcccggggcgggcccgcgggccgccaggaggcgctgcagcgcttcacc
atcgacctcaccgagcaggcccgggcggggcggatcgatccggtggtcgggcgggacgag
gaaatccgccagatgatcgacatcctcatgcgtcggcgccagaacaacccgatcctcacc
ggggaggcgggggtcggcaagaccgcggtggccgaagggttcgcccgccgcatcgcgacc
ggagacgtgccgccgccactgcgcgaggtgagcctgcgcgccctcgatgtcggcctgctg
caggccggcgcgagcgtcaagggcgagttcgagaaccgcctgcgccaggtgatcgacgag
gtccagggctcggagcgcccgatcattctcttcatcgacgaggcgcatacgctgatcggc
gccggcggcgcggcgggcactggcgacgcggccaacctgctcaagccggcgctcgcccgg
gggacactgcgcaccatcggcgccaccacgtggaccgagtacaagaagtacatcgagaag
gacccggcgctaagccgccgcttccaggccgtgcaggtgcaggagccggacgaggagcgg
gcggccgcgatgatccgctccatggcttccgcgctggagcagcatcaccgggtgcagctg
cgcgacgaggcgctgacggcagcggtacgcctctcgagccgctatataccggcacggcag
ctcccggacaaggccgtgagcctgctggacaccgcatgcgcccgggtggcggtgagccag
cacggggtgcctgcggaggtggaggacagccgacgccgcatcgaggcactggaaacggag
ctcgagatcatcggccgcgaacagacggtgggcatggataccggggaccgcgagcccggc
ctgcggcaggccgttgccgaggaacgggagcgcctcgccgggctggaggaggcctggcag
cgggagaagtccgtggtcgaccgcattctcgagctgcgcgcggcgctgcgcgagcgggcc
ggttcggcggccgcggccgacgaggccgccgcggccggcagcggcgatgcgccgagcccg
gcggcaggtggcgacgacaccggcgtggccggtgaggaaagcggtgggcagcagaccccg
gagaccaccgagggcatggttgcgcggctgcgcgagctccaggccgagctcgaggacctg
cagggcgagcggccgctgatcctgccgagcgttgacgcgcaggccgtcgcctccgtggtc
gcggactggacgggcattccggtcgggcggatggtacgagacgagatcgcggccgtcctc
tcgctgtccgagcgcctgtcggagcgggtcaagggccaggaccatgcgcttgcgatgatc
gcgcgacgcgtgcagacggcgcgcgcgaatctggataaccccggcaagcccgtgggcgtg
ttcatgctcgccgggccgtccggagtcggcaagacggagaccgcgctcgcgctcgcggag
acgctctacggtggtgagcacaacgtcatcaccatcaacatgagcgagttccaggaggcg
cacacggtctcgacgctgaagggcgcgccgccgggatacgtgggctacggcgagggcggg
gtgctcaccgaggcggtgcgccggcgcccgtacagcgtggtgctcctcgacgaggtggag
aaggcccacccggacgtccacgagatcttcttccaggtcttcgacaagggctggatggag
gatggcgaaggacggctgatcgacttcaagaacaccctgatcatcctgaccacgaatgtc
ggtaccgagctgatcatgcgcgcctgcggcgacgggcagcagcgccctgacgctgccgag
ctgacccgtgcactgcgcgagccgctgctgcgggtgtttccgcctgcgctgctcggtcgc
atcgtcaccgttccctactacccgctcggcgacgacatgctgcgagacatcatccgcctg
cagctcgatcgcattgcggcccgcgtgcaggacaatcacgaggtgcccttcagctacgag
gaggcggtggtcgaccaggtgcttgcgcgctgtaccgagcttgagagcggcgggcggatg
atcgacgccatcctcaccaacagcctgttgccggacctgagccgcgagttcctcgggcgc
ctgatcgaccaccggccgatccgccgggtgcatgtggacgtgacggacgcggagttcacc
tatgcgttcgagtga

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