Sediminicurvatus halobius: LMH63_12120
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Entry
LMH63_12120 CDS
T09389
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
shai
Sediminicurvatus halobius
Pathway
shai00541
Biosynthesis of various nucleotide sugars
shai01100
Metabolic pathways
shai01250
Biosynthesis of nucleotide sugars
Module
shai_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LMH63_12120 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shai01005
]
LMH63_12120 (kdsB)
Enzymes [BR:
shai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
LMH63_12120 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
shai01005
]
Lipid A
LMH63_12120 (kdsB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
UEX76699
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Position
complement(2662808..2663563)
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AA seq
251 aa
AA seq
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MTAFTVIIPARYGASRLPGKPLRQIAGAPMIRHVWERARESGAERVLVATDDARIADVVS
AFGGEARLTSADHASGTDRLAEVAAREALAGESIVVNLQGDEPLMPPTLLAQVAEVLAMA
PDAAMATLATPLGDSAELDNPNVVKVVTGTDGRALYFSRAPIPWDRDGAPAERLALARRH
LGIYAYRVAFLHRYPGLPATALERLEQLEQLRALANGERIQVADARTSPGPGVDTPEDLE
RVARLLQAREP
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcattcaccgtgatcatcccggcgcgctacggcgcgagccgcctgccgggcaag
cccctgcggcagatcgcgggcgcgccgatgatccgccacgtctgggagcgcgcgcgggag
agcggcgccgagcgcgtgctggtggcgacggacgacgcgcgcatcgcggacgttgtcagc
gcattcggcggtgaggcgcgcctgacgtcggcggatcacgcgagcggcaccgatcgcctg
gcggaggtggcggcgcgggaggcgctggcgggggagagcattgtcgtcaacctgcagggg
gacgagccgctgatgccgccgacgctgcttgcccaggtggcggaggtactggcgatggca
ccggacgcggccatggccaccctggccacgcccctcggggattccgccgagctcgacaac
ccgaacgtggtgaaggtggtcaccgggaccgatggacgggcgctctacttcagccgcgca
ccgatcccctgggaccgggacggcgcgccggcagagcgcctggcgcttgcccgccgacac
cttggcatctacgcctaccgcgtcgccttcctgcaccgctacccgggcctccccgccacg
gccctggagcgtctggagcagctggaacagctgcgtgcgctggccaacggtgagcgcatc
caggttgccgacgcgcgcacgtcccccggcccgggcgtggacacgcccgaggatctggaa
cgcgtcgcccgtctgctgcaggcccgcgagccgtag
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