Spiribacter halobius: LMH63_13425
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Entry
LMH63_13425 CDS
T09389
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
shai
Spiribacter halobius
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shai03032
]
LMH63_13425
03036 Chromosome and associated proteins [BR:
shai03036
]
LMH63_13425
03400 DNA repair and recombination proteins [BR:
shai03400
]
LMH63_13425
DNA replication proteins [BR:
shai03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LMH63_13425
Chromosome and associated proteins [BR:
shai03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LMH63_13425
DNA repair and recombination proteins [BR:
shai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LMH63_13425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
UEX76945
LinkDB
All DBs
Position
complement(2898893..2899165)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEAVAQSADISKSAATRAVDAFVSSVTDALKEGDQVTLVGFGTFTVRERAARTG
RNPRTGASINIPASKVPGFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtcggagctcatcgaagccgtcgcccagtccgcggacatttccaagtccgct
gccacccgggcggtggatgcgttcgtctcttcggtcacggacgcgctgaaggagggagat
caggtcacactggtgggtttcgggacgtttaccgtccgcgagagggccgcccgcaccggt
cgtaatccgcgcaccggcgcctcgatcaacatcccggcgtccaaggtgcccggattcaag
gctggcaaggccctgaaggatgccgtaaactag
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integrated database retrieval system
