Sediminicurvatus halobius: LMH63_14170
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Entry
LMH63_14170 CDS
T09389
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shai
Sediminicurvatus halobius
Pathway
shai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMH63_14170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shai03400
]
LMH63_14170
Enzymes [BR:
shai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LMH63_14170
DNA repair and recombination proteins [BR:
shai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LMH63_14170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
DUF4303
Motif
Other DBs
NCBI-ProteinID:
UEX77084
LinkDB
All DBs
Position
complement(3026142..3026945)
Genome browser
AA seq
267 aa
AA seq
DB search
MAAMDSRRLLYLQRMGIDVWVRRTDAAVPSLRPETAEESERTPESARAGEVSVAQPAPAG
EMPASPDETVREPAGTAAEAADWETLRQQVLSCTRCPLHRTRTQGVFGVGSQTARLLIVG
EAPGAEEDRRGEPFVGRAGQLLDAMLRAIGLDRQTVYITNILKSRPPENRDPRPEEVAAC
EPYLRRQIELLAPALIVAVGRVAAQNLLRTDRPLGRLRGQWHRYGPRETPLLATYHPAYL
LRNPADKRKAWQDLKAVRRALDTEVSA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggctgctatggattcccgccggctgctctacctccagcgcatgggcatcgacgtctgg
gtgcggcgtactgatgcggctgtgccgtccctccggcccgagaccgccgaggagtcggag
cgcacgccggaatccgcgcgggcgggtgaggtgtccgttgcgcagccggcgcctgcgggc
gaaatgccggcgtctcccgacgaaacggtccgcgagcctgccggcaccgccgccgaggcc
gcggactgggagaccctgcgccagcaggtattgagctgcacccgctgcccgctgcaccgc
acgcggacccagggcgtgttcggcgtcggcagccagactgcgcggctgctgatcgtcggc
gaggcgccgggggctgaggaggaccgccggggcgaacccttcgtcggccgggcggggcag
ctgctggacgccatgctgcgggccatcggtctcgaccggcagacggtctacattaccaac
atcctcaagtcgcgcccgccggagaaccgcgatccgcgtccggaggaggtggccgcctgc
gagccctacctgcgccggcagatcgagctgctggcgccggcgctgatcgtggccgtgggc
cgcgtcgccgcgcagaatctgctgcgcacggaccgcccgctcgggcggctgcgcgggcag
tggcatcgctacggcccgcgcgagacgccgctgctggcgacctatcaccctgcctacctg
ctgcgtaacccggcggacaagcgcaaggcctggcaggatctcaaggcggtgcgccgggcc
ctggacacggaggtgagcgcatga
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integrated database retrieval system
