Sediminicurvatus halobius: LMH63_16425
Help
Entry
LMH63_16425 CDS
T09389
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
shai
Sediminicurvatus halobius
Pathway
shai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMH63_16425 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shai03021
]
LMH63_16425 (rho)
03019 Messenger RNA biogenesis [BR:
shai03019
]
LMH63_16425 (rho)
Transcription machinery [BR:
shai03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LMH63_16425 (rho)
Messenger RNA biogenesis [BR:
shai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LMH63_16425 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
S1CSD-TOTE-2
OB_RNB
AAA_22
Spore_III_AA
AAA
Mor
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UEX77501
LinkDB
All DBs
Position
complement(3509287..3510543)
Genome browser
AA seq
418 aa
AA seq
DB search
MNLTELKQKPATELVELAQELGVEGMARSRKQDVIFSLLKAHAKKGEDIWGDGVLEILQD
GFGFLRSANSSYMAGPDDIYVSPSQIRRFNLRTGDTVSGKIRPPKEGERYFALLKVSEIN
FEKPEAAKHKVLFENLTPLFPKERMTLERGNGSTEDLTARVIDLTAPIGKGQRALIVSPP
KAGKTMLLQNIAQSITGNFPECYVIVLLIDERPEEVTEMQRTVRGEVVSSTFDEPASRHV
QVAEMVIEKAKRLVEHKHDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNIEEGGSLSIIATSLVETGSRMDDVIYEEFKGTGNMEIHLDRRVSEKRIYPAINI
NRSGTRREELLMSPDELQKVWILRKLLHPMDELAAIEFLLDKLKDTKTNAEFFQSMKR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaccgaactcaagcagaaacccgccaccgagctggtcgagctcgcccaggag
ctgggcgtcgagggcatggcccgctcgcgcaagcaggacgtcatcttctccctgctcaag
gcgcacgccaagaagggggaggacatctggggcgacggcgtcctggaaatcctgcaggac
ggcttcggcttcctgcgctcggccaacagctcctacatggccggcccggacgacatctac
gtctcgccgagccagatccggcgcttcaacctgcgcaccggcgacacggtgtccggcaag
atccgcccgccgaaggagggggagcgctacttcgcgctgctcaaggtcagcgagatcaac
ttcgagaagcccgaggcggccaagcacaaggttctgttcgagaacctgacgccgctgttc
ccgaaggagcggatgacgctggagcggggcaacggctccaccgaggacctcaccgcccgg
gtcatcgacctcaccgcgcccatcggcaagggccagcgcgcgctgatcgtttcgccgccg
aaggccggcaagacgatgctgctccagaacatcgcgcagtccatcaccggcaacttcccc
gagtgctacgtcatcgtgctgctgatcgacgagcgcccggaggaggtcacggagatgcag
cgcacggtgcgcggcgaggtggtctcctccaccttcgacgagccggcgagccgccacgtg
caggtcgccgagatggtgatcgagaaggccaagcgcctggtggagcacaagcatgacgtg
gtcatcctgctcgactccatcacccgtctggcccgcgcctacaacacggtagtgccgagc
tccggcaaggtgctcaccggcggcgtcgacgccaacgccctgcaccggcccaagcgcttc
ttcggcgccgcccgcaacatcgaggagggcggcagcctgagcatcatcgccacctcgctg
gtggagacgggctcgcgcatggacgacgtgatctacgaggagttcaagggcaccggcaac
atggagatccacctggatcgccgggtctccgagaagcgcatctatccggccatcaacatc
aaccgctccggcacccgccgcgaggagctgctgatgagcccggacgagctgcagaaggtc
tggatcctgcgcaagctcctgcacccgatggacgagctcgccgccatcgaattcctgctc
gacaagctcaaggacacgaagaccaacgccgagttcttccagtccatgaagcggtag
DBGET
integrated database retrieval system
