Sediminicurvatus halobius: LMH63_16705
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Entry
LMH63_16705 CDS
T09389
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
shai
Sediminicurvatus halobius
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shai03021
]
LMH63_16705 (rpoH)
Transcription machinery [BR:
shai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LMH63_16705 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
GntR
HTH_3
KORA
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
UEX77556
LinkDB
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Position
3572545..3573426
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AA seq
293 aa
AA seq
DB search
METTKALVSSQYDQLPLHAGSEDRYIQAVNAIPTLSAEEEESLARRYRDEQDLDAARWLV
LSHLRFVVHIARGYSGYGLPLADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIRAEIH
EFILRNWRIVKVATTKAQRKLFFNLRGSKKRLGWLNHAEVRAVADDLGVKPETVLEMESR
LSGQDVGFDPAPDAGDDDDHGPRAPAAYLEDTRLDPAAEVESADWQTRQSEALGAALAAL
DERSRDIVSRRWLAEPKATLQELADEYGVSAERIRQLEKNAMKKLRTAMGEAA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaccaaggcgctggtaagtagccaatacgatcaactgcccctgcacgcgggc
agcgaagaccgctacatccaggcggtcaacgccatcccgacgctcagcgccgaggaggag
gaaagcctcgcccggcgctaccgcgacgagcaggatctggacgcggcccgctggctcgtg
ctctcgcacctgcgattcgtcgtgcatatcgcccgtggctattcgggctacgggctgccg
ctggccgacctcatccaggagggcaacatcggcctgatgaaggcggtcaagcgcttcgac
ccggatgtcggtgtccggctggtgtcgttcgcggtgcactggatccgcgccgagatccac
gagttcatcctgcgcaactggcgcatcgtcaaggtggcgaccaccaaggcgcagcgcaag
ctgttcttcaacctgcgcggctcgaagaaacggctcggctggctgaatcacgcggaggtc
cgggccgttgccgatgacctgggcgtgaagccggagacggtgctggagatggagtcccgg
ctctccggccaggatgtcggattcgaccccgccccggacgccggcgacgacgacgaccac
ggcccgcgcgccccggcggcctatctcgaggacacccgccttgacccggccgccgaggtg
gagagcgcggactggcagacccgccagagcgaggcgctcggcgccgcgctggcggcgctg
gacgagcgcagccgcgacatcgtctcccgccgctggctggcggagccgaaggcgaccctg
caggagctggcggacgagtacggcgtctccgcggagcgcatccgacagcttgagaagaac
gcgatgaagaagctgcgcaccgcgatgggcgaggcggcctga
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