KEGG   Sediminicurvatus halobius: LMH63_16805
Entry
LMH63_16805       CDS       T09389                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
shai  Sediminicurvatus halobius
Pathway
shai03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:shai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LMH63_16805 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shai03400]
    LMH63_16805 (xth)
Enzymes [BR:shai01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     LMH63_16805 (xth)
DNA repair and recombination proteins [BR:shai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     LMH63_16805 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: UEX77574
LinkDB
Position
complement(3597525..3598304)
AA seq 259 aa
MPLTITSANLNGIRAAARKGFFDWLPEESPDILCVQETKAQRAQLTDDFYFPPGYRAWFA
DAERKGYSGVALYANREPDEVVTGIGMPEIDREGRWLEARFGDLAVVSFYMPSGSSGEHR
QDVKDAFMEPFLARLQALRESGRELIICGDWNIAHTARDLRNWRSNQKNSGFLPHERAWM
DRLFGEAGFVDAFRVVNDQDHQYTWWSYRGRAWDNNTGWRIDYHVITPGLRDRVLDARIH
TGQRFSDHAPLTLDYDWPW
NT seq 780 nt   +upstreamnt  +downstreamnt
atgccgctgaccattaccagtgccaacctcaatggcattcgcgccgccgcccgcaagggc
ttcttcgactggctgccggaggagtcaccggacatcctatgcgtccaggagaccaaggcg
cagcgcgcgcagctcaccgacgatttctacttcccgcccggctaccgggcctggttcgcc
gatgccgagcgcaagggctacagcggcgtggcgctctacgccaaccgcgagccggacgag
gtggtcacggggatcggcatgcccgagatcgaccgcgaggggcgctggctggaggcgcgc
ttcggcgatctggcagtggtctccttctacatgccctcgggcagctccggcgagcaccgc
caggacgtcaaggacgccttcatggagcccttcctcgcgcgcctgcaggcgctgcgcgag
agtgggcgcgagctcattatctgcggcgactggaatatcgcgcacaccgcgcgggacctg
cgcaactggcgctcgaaccagaagaactccggctttctgccccacgaacgggcatggatg
gaccgcctgttcggcgaggccggcttcgtcgacgccttccgggtggtgaacgatcaggac
caccagtacacctggtggtcctaccgcggccgggcctgggacaacaatacggggtggcgg
atcgactaccacgtcatcaccccggggctgcgggaccgggtcctggatgcccgcatccac
accgggcagcgcttctccgaccacgccccgctgacgctggattacgactggccctggtga

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