Spiribacter halobius: LMH63_17585
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Entry
LMH63_17585 CDS
T09389
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
shai
Spiribacter halobius
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shai03032
]
LMH63_17585
03036 Chromosome and associated proteins [BR:
shai03036
]
LMH63_17585
03400 DNA repair and recombination proteins [BR:
shai03400
]
LMH63_17585
DNA replication proteins [BR:
shai03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LMH63_17585
Chromosome and associated proteins [BR:
shai03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LMH63_17585
DNA repair and recombination proteins [BR:
shai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LMH63_17585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
UEX79930
LinkDB
All DBs
Position
3773404..3773682
Genome browser
AA seq
92 aa
AA seq
DB search
MNKSQLVDEIYAKVDGITKKQAGEMLDTLLDTVIASVADGRDVALSGFGKFTRVERAART
ARNPQTGAMISLPAAKAPGFRAGKAFKVAVNR
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
ctgaacaagtcccaactcgtcgacgagatctacgccaaggtggacgggatcacgaagaag
caggcgggcgagatgctcgacactctgctcgatacggtgattgcctccgtagcggacggc
cgggatgtcgcgctctcgggattcggcaagttcacccgtgtcgagcgtgcagcccgcacc
gccaggaaccctcagacgggcgccatgatcagcctgcccgccgcgaaggcgcccggcttc
agggccggcaaggctttcaaggttgccgtcaaccgctga
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integrated database retrieval system
