Spiribacter halobius: LMH63_18340
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Entry
LMH63_18340 CDS
T09389
Name
(GenBank) TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
shai
Spiribacter halobius
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shai03000
]
LMH63_18340
Transcription factors [BR:
shai03000
]
Prokaryotic type
Helix-turn-helix
Other families
LMH63_18340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_IclR
PLDc_2
MarR_2
Motif
Other DBs
NCBI-ProteinID:
UEX77860
LinkDB
All DBs
Position
complement(3955598..3956470)
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AA seq
290 aa
AA seq
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MASKLRFKESVPGDLSRELQRLGFTDYEAKIYIQLLRTNPVTAYELSKASGVPRANAYHA
LQSLTRKEAVQPVSEDPVRFVPVPPEVLLEGIASSTQRLCDRLAEDLRGVGGPEDTHYVW
TISGEAAVEERVTQMIRGAESSIWIKAQAASLRHHETALREMAARGVEILVILFGDAAEE
FRFGDNVRVFLHESNGRTIGTADNLFTITVDHEQLLTANVAGKVFASYTRNRPIVITAES
LIRHDYYLAEIMARFGEEIDAAFGPHLQRLREACFTPEQLERFHRQVNLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttggccagcaaactgcgattcaaggaaagcgtacccggggatctctcccgggagctgcag
cggctcggcttcaccgactacgaagccaagatctacatccagctgctgcgcaccaacccc
gtcaccgcctacgagctgagcaaggcctccggcgtgccacgggccaatgcctatcatgcc
ctgcagagcctcacccgcaaggaggcggtgcagccggtgagcgaggacccggtgcgcttc
gtgccggtgccgccggaagtcctgctggagggtatcgcgagctccacccagcggctctgc
gaccgcctcgccgaagacctgcgcggcgtcggtggcccggaggatacccactacgtgtgg
accatctccggcgaggccgcggtcgaggaacgggtcacgcagatgatccgcggcgccgag
agcagcatctggatcaaggcccaggccgcctccctgcggcaccacgaaaccgctctgcgg
gagatggctgcccgcggcgtggagatcctggtgatcctgttcggcgacgcggctgaggag
ttccgcttcggcgacaacgtgcgcgtgttcctgcacgagagcaacgggcgcaccatcggc
acggcggacaacctgttcaccatcaccgtcgaccatgagcagctgctcacggccaatgtc
gccggcaaggtattcgcgtcctatacccgcaatcgccccatcgtgattacggcggagtct
ctcatccgccacgactactacctcgcggagatcatggcccgcttcggcgaggagatcgac
gccgccttcggcccccacctgcagcggctgcgcgaggcctgcttcacccccgagcagctg
gagcgcttccaccggcaggtgaatctcggctga
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