Sulfurospirillum halorespirans: SHALO_0008
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Entry
SHALO_0008 CDS
T04475
Name
(GenBank) uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shal
Sulfurospirillum halorespirans
Pathway
shal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHALO_0008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shal03400
]
SHALO_0008
Enzymes [BR:
shal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SHALO_0008
DNA repair and recombination proteins [BR:
shal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHALO_0008
Prokaryotic type
SHALO_0008
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AOO63811
UniProt:
A0A1D7TFP3
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All DBs
Position
8239..8913
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AA seq
224 aa
AA seq
DB search
MVDPKIEESWKNVLHVEFQKPYFESLKSFLVEEKKNYTVYPSGANIFAAFDNTPFESVEV
VILGQDPYHGAHQAHGLSFSVQDGIQHPPSLQNIFKELRDDMGCAIPKSGNLSAWAKQGV
FLLNTVLTVRASEANSHRGQGWENFTDAVIKTLSAQKEHLVFILWGSPAGAKASLIDSKK
HLILRAPHPSPLSSYRGFFGSKPFSKSNEYLSSKGKKPINWCLA
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatccaaaaattgaagagagttggaaaaatgttttacatgtagagtttcaaaag
ccctattttgagagcttaaaaagctttttggtggaagagaaaaaaaactacactgtttat
cccagtggtgcgaatatctttgcggcatttgataacacaccttttgagagcgttgaagtg
gtcattttagggcaagacccgtaccatggagcccatcaagcgcacgggctctctttttcg
gtacaagatggcattcagcatccgccatccctccaaaatatttttaaagaactgcgcgat
gacatgggatgtgcgattcccaaaagtggcaatttaagcgcgtgggcaaaacaaggcgtt
ttcttactcaacacggttttaaccgttcgtgccagtgaagccaattcccaccgtggtcag
ggttgggagaattttacggacgccgtgattaagacactaagcgctcaaaaagagcatttg
gtcttcattctttggggctcacctgcaggtgctaaagccagtctgattgatagtaaaaaa
catctcattttacgtgctcctcacccttcacctctctcttcgtaccgtggtttctttggt
tccaagcctttttcaaaaagcaacgaataccttagcagtaagggtaaaaagcccattaat
tggtgtttggcttga
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