Sulfurospirillum halorespirans: SHALO_0834
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Entry
SHALO_0834 CDS
T04475
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
shal
Sulfurospirillum halorespirans
Pathway
shal03030
DNA replication
shal03430
Mismatch repair
shal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHALO_0834
03430 Mismatch repair
SHALO_0834
03440 Homologous recombination
SHALO_0834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shal03032
]
SHALO_0834
03400 DNA repair and recombination proteins [BR:
shal03400
]
SHALO_0834
Enzymes [BR:
shal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHALO_0834
DNA replication proteins [BR:
shal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SHALO_0834
DNA repair and recombination proteins [BR:
shal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SHALO_0834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AOO64616
UniProt:
A0A1D7TI13
LinkDB
All DBs
Position
845858..849406
Genome browser
AA seq
1182 aa
AA seq
DB search
MSDTPYTHLHLHTEYSLLDGANKIGKLAKKLKSQGVTSVAITDHGNMFGAIDFYKTMRKE
GIKPIIGMEAYIHNQDDIGDKTTKQRFHLCLYAKNEVGYKNLMYLSSMSYIKGFYYYPRI
NKQILKEHSEGLVCSGACLQGEVNWHLNLNNKRNVQFGAKGYERAKEIALEYKAIFGEDF
YLEVMRHGIPDQHFIDDDILRISQETGIKLIATNDTHYLEQDNAEAHEAFMCIAMNKEFD
DPNRLRHSVHEFYVKSPAQMSDLFADIPEAISNTQEIVDKCNLEIKLGDPTPPKFKFTKE
YAAKEGLTFENDDDFFAYKSREGLEKRLLHVEPSKHEEYKARLEREIKIICDMKFPGYML
IVWDFIREAKERGVPVGPGRGSAAGSLVAFSLFITDIDPMPYNLLFERFLNPERISMPDI
DIDFCQSRRGEIIDYVVEKYGRFNVAQVITFGKLLAKGVIRDVARVLAIPYAEADAMAKL
IPDELGITLNGIGVEGEEGYKGGAYQKEPKLRELIESSPKMQRVWKFALALEGLNRNSGM
HAAGVVISDEELWHKTPLYQPSGEDHLVTQYSLNYLEDVDLIKFDFLGLKTLTVIDNALK
LIKLRYQKEIDFTTIDMNDPKVYELIQSGDTVGLFQIESSGMQSLNERLKPTNFEDLIAV
LALYRPGPMESGMLDDFIDRKNGRKEISYFFDEFTEPLRPILEPTYGVIVYQEQVMQIVQ
SIGGFSLGEADLIRRAMGKKKIDYMKQKAEEFAQGAVDQGLDRAHAIELFGLIEKFAGYG
FNKSHSAAYAMVTFETAYLKCYYPQEFMAALLTSEQDNTDKIVKYIDEVKRLGLKLLPPS
IQHSLIEFSAITDGDGQEAILFGMGAIKGVGNAAISKILEAREGALFSDMSDFISRIDSS
KVNKKVLESFIKSGSFDDFGYSRRALLEGIDSIIEASAECSRAKKMAEYSLFGDAEEMTT
VHVSIENIPEFDNKRMLELEKETIGFYISGHPLDAFRAEIDEMSYTLSSEKDQIEDGSKA
LFIGKVEGITEKISKKGNKFGIISLMDFHGSMELTVFEKQLEALSRMDIEKPLCFKVDVS
NDGQNTKMRVMKIMELSDAKKEKIETKVIEVPLDPKVLLIDLSDDSSKLEFLYQIVRESA
GRRPLHLVITSKLQDVLIETGFGVDDSIDEKLAGMEFVKVVA
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacaccttacacccatttacatttacacaccgaatactcccttttggatggc
gccaataaaataggcaagcttgccaaaaaactcaaatcccaaggcgtcacttcggttgcg
ataaccgatcatggaaacatgtttggcgcgattgatttttacaaaacgatgcgcaaagag
ggcattaagcccatcattggcatggaagcgtacattcacaaccaagatgacatcggcgat
aaaacgaccaaacagcgttttcacctctgtttgtatgctaaaaatgaggtcggctataaa
aatttaatgtacctctcttcgatgagttatatcaaaggcttttactactatccgcgcatt
aacaaacagattttaaaagagcattcggaaggcttggtctgctcaggggcatgtctgcaa
ggtgaagtcaactggcatctcaatctcaacaacaaacgcaacgtccaatttggcgcgaaa
gggtatgaacgcgctaaagaaatagcccttgagtacaaagcaatttttggcgaggacttt
tacttagaagtgatgcgtcatggcattcccgatcaacactttatcgacgatgacattttg
cgtatctcccaagagacgggcatcaaacttatcgccaccaacgacacccactacttagag
caagacaatgccgaagcgcacgaggcgtttatgtgtatcgcgatgaacaaagagtttgat
gatccaaaccgtctgcgccactccgtgcatgagttttatgtcaaatcacccgcacaaatg
agcgacctgtttgccgacattcctgaagcgatttccaacacgcaagagattgtcgataag
tgcaatttagagattaaactgggcgatccaacccctccaaaatttaaatttaccaaagag
tatgccgctaaagaggggcttacttttgaaaatgacgatgacttctttgcctataaaagt
cgcgaaggactcgaaaaacgtcttttacatgtagagcctagcaaacacgaagagtacaaa
gcaaggcttgagcgcgagatcaaaatcatctgcgatatgaagtttccgggttatatgctc
atcgtttgggattttatccgtgaagccaaagagcgtggtgttcctgtaggccctgggcga
ggttcagccgcgggaagcttggttgccttttcgctttttatcaccgacatcgacccgatg
ccatacaatctgctcttcgagcgatttttgaaccctgaacgtattagtatgcccgatatc
gatattgacttttgtcaaagcagacggggcgaaatcattgactatgtggtcgaaaaatac
ggtcgtttcaacgtagcgcaagtcatcacctttggtaaactcttagccaagggagtcatt
cgtgacgtggcgcgcgttttggcgattccttacgcagaagccgatgcgatggcaaaactg
attcccgatgagctgggcattacactcaacggcattggcgtggagggcgaagagggctac
aaaggtggcgcgtaccaaaaagagccgaagcttcgtgaactcatcgaaagcagtccaaaa
atgcaacgtgtttggaagtttgcgttagcgcttgaaggactgaaccgaaactcaggtatg
cacgccgcgggtgtggtcatcagcgatgaagagttgtggcataaaacacccctttatcag
ccctctggcgaagatcatctcgtcacgcagtattcgctcaattaccttgaagatgtggac
ttaatcaagttcgacttcttgggtctgaagacccttacggtgattgataatgcgcttaaa
ttgattaagttacgttaccaaaaagagattgattttacgacgattgatatgaacgatccc
aaagtgtatgagttgattcaaagtggcgatacggtgggactgtttcagatcgaatccagt
ggtatgcaatcactcaatgaacgccttaaaccgaccaactttgaagatcttattgcggtg
ttggcattgtaccgtccaggtccgatggaatcaggcatgttggatgactttatcgaccgt
aaaaatggtcgtaaagagatcagctatttctttgatgagtttacagaacctcttcgtccg
atcttggagccaacctatggggttatcgtttaccaagaacaggttatgcagatcgttcaa
tccatcggtgggtttagccttggcgaagcggatttgattcgtcgtgcgatgggtaagaaa
aagatcgactacatgaaacaaaaagccgaagagttcgcgcaaggtgctgtcgatcaaggc
ttagatcgtgcgcacgccattgagctgtttggactgatcgaaaagtttgcaggatacggt
tttaacaaatcgcactccgcggcgtacgcgatggttacgtttgagaccgcgtatctgaaa
tgctactatccgcaagagtttatggcggcacttctcacctcagagcaagacaacaccgat
aaaatcgtgaagtacattgatgaggtcaaacgtcttggactcaaacttttaccaccctcc
attcagcacagtttgattgagtttagtgcgattaccgatggtgatgggcaagaggcgatt
ctctttggtatgggagcgatcaaaggggttggcaatgcggcgatcagtaagattttagaa
gccagagaaggggcactcttttccgatatgagcgattttatctcccgcattgacagctct
aaagtcaataaaaaagtgttggagtcgttcatcaaatcgggcagttttgatgattttggc
tactccagacgcgctcttttagaggggattgatagcatcattgaagcgagtgctgagtgc
agtcgtgcgaaaaagatggcggaatactccttatttggcgacgccgaagagatgacaacc
gtacatgtaagcatcgaaaatatccccgaatttgataacaaacgtatgctggaactggaa
aaagagaccattggtttttacatttcaggacatcctcttgatgcgtttagagccgaaatt
gatgagatgagttatacgctttccagtgaaaaagatcagatcgaagatggcagtaaagcg
ctgtttatcggcaaagtagaaggcattacggagaagatcagcaaaaaagggaataaattt
ggcatcatctcgctgatggattttcacggctcgatggagctcacggtgtttgaaaagcaa
ctcgaagcactctcacgaatggacattgaaaaaccgctctgctttaaagtcgatgtgagc
aacgatgggcaaaacaccaaaatgcgcgtcatgaaaatcatggaactcagtgatgctaaa
aaagagaagatcgaaaccaaagtcattgaagtgccacttgatccaaaggtacttttgatt
gatctgagtgatgattccagcaagctggaatttttataccaaatcgtacgcgagagtgca
gggcgcagacctttgcatctggtcattacctccaagttgcaagatgtgctcatcgaaaca
ggttttggcgtggatgatagcatcgacgagaaactagcaggaatggagtttgtgaaggtg
gttgcttaa
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