Sulfurospirillum halorespirans: SHALO_1004
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Entry
SHALO_1004 CDS
T04475
Name
(GenBank) heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
shal
Sulfurospirillum halorespirans
Pathway
shal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SHALO_1004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shal03019
]
SHALO_1004
03110 Chaperones and folding catalysts [BR:
shal03110
]
SHALO_1004
03029 Mitochondrial biogenesis [BR:
shal03029
]
SHALO_1004
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shal04147
]
SHALO_1004
Enzymes [BR:
shal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SHALO_1004
Messenger RNA biogenesis [BR:
shal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SHALO_1004
Chaperones and folding catalysts [BR:
shal03110
]
Heat shock proteins
HSP60 / Chaperonin
SHALO_1004
Mitochondrial biogenesis [BR:
shal03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SHALO_1004
Exosome [BR:
shal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SHALO_1004
Exosomal proteins of other body fluids (saliva and urine)
SHALO_1004
Exosomal proteins of breast cancer cells
SHALO_1004
Exosomal proteins of colorectal cancer cells
SHALO_1004
Exosomal proteins of bladder cancer cells
SHALO_1004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
GPP34
Cas_APE2256
Motif
Other DBs
NCBI-ProteinID:
AOO64785
UniProt:
A0A1D7TID6
LinkDB
All DBs
Position
complement(1027446..1029086)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKEIQFSDNARNALYEGVKKLNDAVKVTMGPRGRNVLIQKSFGAPSITKDGVSVAKEIE
LKDTIENMGAQLVKEVASKTADQAGDGTTTATVLAHAIFKEGLRNITAGANPIEVKRGMD
KAAEAIIAELKKMAKAVKDKKEIAQVATISANSDTVIGELIAEAMEKVGKDGVITVEEAK
GIQDELDVVEGMQFDRGYLSPYFVTNPEKMQTILEHPYVLLYDKKVSNLKDLLPVLEQVQ
KTGKPLLIIAEDIDGEALATLVVNKLRGVLNIAAVKAPGFGDRRKAMLEDIAIISGGEVI
SEELGRTLEAATLADLGQAARIVIDKDNTTIVNGNGDKARIDARVGQIKAQIAETSSDYD
REKLQERLAKLSGGVAVIKVGASTETEMKEKKDRVDDALSATKAAVEEGIVVGGGSAFLL
ANAKIKLNLTGDEAIGAEIVTRALKAPLKQIAENAGFDAGVVANNVLTSNKPNYGFNAAT
GEYVDMFEAGIVDPVKVSRIALQNAVSVASLLLTTEATITNAKEDKASAMPDMSGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagattcaattttcagataatgctcgcaatgcactctacgaaggtgttaaa
aaactcaatgacgctgtaaaagttacaatgggaccacgcggtcgcaatgttttgatccaa
aaaagctttggcgctcctagcatcaccaaagatggtgtttctgtggctaaagagatcgaa
cttaaagataccatcgaaaacatgggtgctcaactggttaaagaagttgcatcaaaaaca
gcggatcaagcaggggatggtacaaccactgcaacggttttggcgcatgctattttcaaa
gagggtcttagaaacatcactgcgggtgcaaaccctattgaagtgaaacgtggtatggac
aaagcggctgaagcgattatcgctgagcttaaaaaaatggcaaaagccgttaaagataaa
aaagagatcgcacaagttgcaactatttctgccaactcagacacggttatcggtgagttg
atcgctgaagcgatggaaaaagtgggcaaagatggcgttattaccgttgaagaagccaaa
ggtatccaagacgaacttgacgtcgttgagggtatgcagtttgatcgtggttacctttct
ccttactttgtgaccaatcctgagaaaatgcaaacgattttagagcatccttatgtttta
ttgtatgacaaaaaagtttctaaccttaaagatcttcttcctgtacttgagcaagttcaa
aaaacaggtaaacctttgcttatcatcgcagaagacatcgacggtgaagcattggcaacg
ttagttgtaaacaaactcagaggcgttcttaacatcgctgcggttaaagcaccaggtttt
ggcgatagaagaaaagcgatgcttgaagacatcgcgatcatcagtggtggtgaagtgatc
agtgaagagctaggacgtacacttgaagcggctaccttggcagatcttggtcaagcagca
cgcattgtgatcgacaaagacaacacaaccatcgtgaatggcaatggcgacaaagctaga
attgacgctcgtgttggtcagatcaaagcacaaatcgcagaaacaagcagtgactacgat
agagaaaagcttcaagagcgtttagcaaaactcagcggtggtgttgcggtcattaaagtg
ggtgcttcaactgaaactgagatgaaagagaaaaaagaccgtgtggatgatgcactttca
gcaacaaaagcagctgttgaagaaggcatcgttgtgggtggtggttctgcattcttgctt
gcaaacgcaaaaatcaaactcaacctcactggcgatgaagcgattggcgctgagatcgtt
acacgtgctcttaaagctccattaaaacaaatcgctgagaacgctggctttgatgcaggc
gttgtggcgaacaatgttctaacaagcaacaaaccaaactatggctttaacgctgcaacg
ggtgagtatgtcgatatgtttgaagcgggcatcgttgatcctgttaaagtttcacgtatt
gcacttcaaaatgcggtttctgtggcaagtctccttttgacaacggaagcgaccatcacc
aatgcaaaagaagataaagcgtctgcaatgccagatatgagtggcatgggcggaatggga
ggcatgggcggaatgatgtaa
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