Sulfurospirillum halorespirans: SHALO_1085
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Entry
SHALO_1085 CDS
T04475
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shal
Sulfurospirillum halorespirans
Pathway
shal03030
DNA replication
shal03430
Mismatch repair
shal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHALO_1085
03430 Mismatch repair
SHALO_1085
03440 Homologous recombination
SHALO_1085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shal03032
]
SHALO_1085
03400 DNA repair and recombination proteins [BR:
shal03400
]
SHALO_1085
Enzymes [BR:
shal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHALO_1085
DNA replication proteins [BR:
shal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SHALO_1085
DNA repair and recombination proteins [BR:
shal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SHALO_1085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AOO64865
UniProt:
A0A1D7TIL8
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All DBs
Position
1120345..1120956
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AA seq
203 aa
AA seq
DB search
MLSSFFAKRNAKKLKDEQYRFLFEEAPEDEVVVFDTETTGLSPKNDEILSIGAVKIKGNK
ILMSEKFELFIKPSREITEKSIKIHQIRNVDLQNGIAPHEAIVQFLHFIGSRPLVGYYLE
FDIKMMNTYVKPWLGINLPNPQIEVSGLYHDKKIKFIPDGVIDLRFDVMMKELGLPIFGK
HDALNDAVMTAMMYIKLQNVERV
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctctttttttgccaaacgaaacgctaaaaaactcaaagacgagcagtaccgt
tttttatttgaagaagcgcccgaagatgaagtcgtggtgttcgacaccgaaacgacaggg
ctaagccccaaaaacgacgagattctctccatcggcgcggtgaaaatcaaaggcaataaa
atcctgatgtccgaaaagtttgagctcttcatcaaacccagccgcgagatcacggagaag
agcatcaaaatccatcaaattcgcaatgtcgacttgcaaaatggcatcgccccacacgaa
gcgattgtccagtttttgcacttcatcggctcacgcccactggtcggctactaccttgag
tttgacatcaaaatgatgaacacctacgtcaaaccctggcttggcatcaacctccccaat
ccccaaatcgaagtgtcaggactctaccacgataaaaaaattaagttcattcccgatggc
gtgatagacctgcgttttgatgtgatgatgaaagagttgggcttgccaatcttcgggaag
catgacgcgctgaatgacgcggtgatgacggcgatgatgtatattaaattgcagaatgtt
gagagggtgtag
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