Sulfurospirillum halorespirans: SHALO_1180
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Entry
SHALO_1180 CDS
T04475
Name
(GenBank) exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
shal
Sulfurospirillum halorespirans
Pathway
shal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SHALO_1180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shal03400
]
SHALO_1180
DNA repair and recombination proteins [BR:
shal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SHALO_1180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
AOO64958
UniProt:
A0A1D7TIV8
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All DBs
Position
1208291..1209175
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AA seq
294 aa
AA seq
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MKIIVLDTETTGMLEKDRICQLSFLVLNEEFEIEEVYNDLSMPPLPISYEAMAIHHITPE
MLEGEPACVQTKAYKRLCELNAVSNILVIQNAAFDLGMLAKEGFTSQMNLIDTFRVLRAL
YPNDGSFSLQFKRYQWGLYKEEEGIAKKLNITIKAHDALGDVIVLKHLFERLCEDHSMPK
MILLCSEPIILSHIPYGKNRGKKFVDIAKSDRQDLHYMLSSNGLDEDMKASILHALESTK
ESVTLTIGFGKYAGKTPLEVLELDRNYLVWMVNKMDNLSSELKEAIEKVLVSYP
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattattgttttagataccgaaacaacgggaatgttagagaaagatcgcatctgc
cagcttagttttttagtcttaaatgaggagtttgagatcgaagaggtttataacgatctg
agcatgccaccccttcctatctcttacgaagcgatggcgatccaccacatcacgcctgaa
atgcttgaaggtgagcccgcgtgcgtgcaaaccaaagcgtataaaagactgtgtgagctg
aacgcagtttccaacatcctcgttattcaaaatgccgcgtttgaccttggaatgctcgcc
aaagagggctttacctcgcagatgaatctcatcgacaccttccgtgttttgcgtgctctt
taccccaacgatggctcgtttagcttgcaatttaaacgctaccaatggggactctacaaa
gaagaagagggcatcgccaaaaagcttaacatcaccatcaaagcacacgacgcactaggc
gatgtcatcgtactcaaacacctctttgagcgactgtgcgaagatcattctatgccaaaa
atgatcctgctctgctccgagcccatcatcctcagccacattccctacggcaagaacaga
ggcaaaaagttcgtcgatatcgcaaagagcgaccgccaagacctccactatatgctaagt
tccaacggactcgacgaggacatgaaagcctccatactccacgcgctagagagcaccaaa
gagagcgtgaccctaaccatcggctttggcaaatacgcaggcaaaaccccgcttgaagtt
ttagagcttgatcgtaactatcttgtgtggatggtcaataagatggataatttgagtagc
gaactgaaagaggcgatagagaaggtgttggtttcgtatccgtag
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