Sulfurospirillum halorespirans: SHALO_1928
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Entry
SHALO_1928 CDS
T04475
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
shal
Sulfurospirillum halorespirans
Pathway
shal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SHALO_1928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shal03019
]
SHALO_1928
Enzymes [BR:
shal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SHALO_1928
Messenger RNA biogenesis [BR:
shal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SHALO_1928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SNF2-rel_dom
Helicase_RecD
UTP25_NTPase-like
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOO65699
UniProt:
A0A1D7TL21
LinkDB
All DBs
Position
complement(1945767..1947077)
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AA seq
436 aa
AA seq
DB search
MLFEKLGLIVPLQEAVTELGYTKPTPVQNKVIPLVLEGKDVMATAQTGTGKTAAYALPLL
QILAKKTQKSTTKKVVRALILVPTRELASQVNLNVQEYGKNLELTIGAIYGGVKFTPQVK
KLEKGIDVLIATPGRLLEHIKLDNVDLSRVEMLVFDEADRILDMGFWDEVETLLSLLPKK
RQTLLFSVGVSKSVKRLSEVSLKKPITVAINNQGEFAKNVQQTIYVVDKERKCEMLSFMI
GTENWHQVLVFTKTKQSADEVGDYLSKSGLKTLVLHGDKAHSQRTKAVAAFKENSIRVLV
ATDIASRGLDIEDLPHVINYELPGDAEDYLHRAGRTGRAGKEGRAISFVSQEEKLKLKEI
EKILKYTLKTEFYPGFETQVWVEKEAKKHTIQAKIDREKANKKPMGLRKKREEIKANKAK
KTAKTCGIGAKNCKVK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgttatttgaaaagctaggcttgattgtaccactacaagaagcagtcactgaacttggg
tacacaaaaccaacgcctgtgcaaaacaaggtcatccctttggtgttagagggaaaagat
gttatggcaacggcgcaaacgggcacgggaaaaacggccgcttacgcactgccactttta
caaatattggctaaaaaaacacaaaaatcaaccacaaaaaaagtcgtacgtgcgcttatt
ttagtgcccacacgtgagcttgcgtcacaagtcaatctcaacgtgcaagagtatggcaag
aaccttgagttaaccatcggggcgatttacggtggtgtaaagtttacaccgcaagttaaa
aaattggagaagggcatcgatgttcttatcgccactccagggcgacttttagagcatatc
aaactggacaatgttgatctctctcgtgtggagatgctcgtttttgatgaagccgataga
atcctcgacatgggcttttgggatgaggttgagacattgctttcccttttacctaaaaaa
cgtcaaaccttgctgttttccgtcggagtttccaagtcggtcaaacgtctttccgaagtc
agtttgaaaaaacctattactgtggctatcaacaatcaaggtgaatttgctaaaaatgtg
caacaaaccatttacgtggtggacaaagagcgcaagtgcgagatgctctctttcatgatc
ggtactgaaaactggcatcaagtgttggtctttaccaaaacgaaacagagtgctgatgaa
gtgggcgattacctcagtaaaagtggcttgaaaacattggtcttgcatggcgataaagcg
cactcacaacgcaccaaagcggttgctgcttttaaagaaaactctattcgtgtgttggtc
gctacggacatcgcctctcgtggtcttgacatcgaagatctgccgcatgtcattaactac
gaactccccggagacgcagaagattatttgcatcgagcaggacgtacgggtcgtgcaggt
aaagagggacgagcgatttcgtttgtttctcaagaagaaaagttaaagttaaaagagatc
gaaaagatcctaaaatacacgcttaaaacagagttttaccctggttttgagacgcaagta
tgggttgaaaaagaggcgaaaaaacatacgattcaagccaaaattgaccgtgaaaaagcc
aataaaaagccaatgggtcttcgtaaaaaacgtgaagagatcaaagcaaataaagccaaa
aaaactgctaaaacatgtggtattggcgctaaaaattgtaaagtaaaataa
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