Sulfurospirillum halorespirans: SHALO_2014
Help
Entry
SHALO_2014 CDS
T04475
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shal
Sulfurospirillum halorespirans
Pathway
shal03420
Nucleotide excision repair
shal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SHALO_2014
03430 Mismatch repair
SHALO_2014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shal03400
]
SHALO_2014
Enzymes [BR:
shal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SHALO_2014
DNA repair and recombination proteins [BR:
shal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SHALO_2014
MMR (mismatch excision repair)
Other MMR factors
SHALO_2014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
CarD_TRCF_RID
AAA_11
DUF3718
Motif
Other DBs
NCBI-ProteinID:
AOO65785
UniProt:
A0A1D7TLA4
LinkDB
All DBs
Position
complement(2032403..2034448)
Genome browser
AA seq
681 aa
AA seq
DB search
MQDLAMLNESQQDAVKCVDGPVLILAGAGSGKTKTITSRLAYLLSLGIPPANTLTLTFTN
KAASEMRERAMAMIEEHSYPPLLCTFHKFGLLFLKFHIEKIGRKNSFVVIDTDDKKRILK
SFSTSTELSTGMIASEISRYKTSLIDPKVAWEKAEQKSYQVIAKLYEQYEDYLQSNNLVD
FDDLLVLPYKILEGDDALCEEVSKRYQYIMVDEYQDTNELQYKLLRKLCFTHNNLCVVGD
DDQSIYGWRGANIKNILEFHESFDNVKIVKLEKNYRSTTQILKAANDLIEHNRGRIGKVL
ESTKGDGKAIDVIDSHDENQEAHTIAKRIRKLIESGVNPHEIAVLYRINALSRSLEEGLN
KEKIPYNMVGGVKFYERAEVKDVISYLRVIANPHDDFSIKRIINRPKRGLGKVTIERIIK
SAYDNHQSIYEYITCNEAAIEKEATKKASLALKEFVQNIAHMQSIQENSTYDMIDAIEES
FAIKAYYTNQPDSLDRLSNIDEFYGLFRDYVKQNPQMGVDDFLNELALQSDQDQIDSENI
SIMSIHASKGLEFEYLFVIGLEEGFFPLIGDGSDIEEERRLGYVAITRAKKELTLSFSGS
RFYKGRRTELTKSRFLKEAGVCEGSLILEKTTSFKKGDLVKHKIFGIGRITEVSKVGREF
KLQINFSGTKRDILASFVEKI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatttagcgatgttaaacgaatcacaacaagatgcagtcaaatgcgtcgatggt
cctgtccttatcttagcaggtgcaggcagtggtaaaaccaagacgattacgtcacgcttg
gcgtacctgctctctttaggaattcctcctgcgaacaccttaacgctcacctttaccaac
aaagccgcaagtgagatgagagaacgtgcgatggcgatgatcgaagagcacagctatccg
ccactcttgtgtacctttcataaatttggtctgctttttttaaagtttcatattgaaaaa
atagggcgaaaaaacagctttgtggtcatcgatacggacgataaaaagcgcatcttaaaa
agttttagcacgagtactgaactttcaacgggcatgatcgccagtgagatttcacgctat
aaaacatctctaatcgacccaaaagtggcatgggaaaaggcggagcagaagagctaccaa
gtgattgccaagctttacgagcagtatgaagactacttacaatccaataatttggttgat
tttgatgaccttttagtcctcccctataaaattttagaaggcgatgacgctttgtgcgaa
gaggtgagcaagcgctaccagtacattatggttgatgagtaccaagatacgaatgaactg
caatacaaactgcttcgcaagctctgtttcacgcacaataatctctgtgttgtgggtgat
gatgatcagagcatttacggttggcgtggggcgaatatcaaaaatattttagagtttcac
gagtcgtttgacaatgttaaaatcgttaagttagagaaaaattaccgatccacaacccaa
attcttaaagcagcaaacgatcttatcgagcataaccgtggacgcattggcaaagtactt
gagagtacgaagggtgatggcaaagcgattgatgtgatcgattcacacgacgaaaatcaa
gaagcgcatacgattgcaaagcggattcgaaagctcattgaaagtggtgtcaaccctcat
gaaatcgctgttttataccgtatcaacgcgctcagccgttcattagaagaggggctcaat
aaagagaaaattccttacaatatggtcggtggtgtgaagttttacgagcgtgctgaggtc
aaagatgtcatcagttacctgcgcgtcattgccaatcctcatgatgatttttcgatcaaa
cgcattatcaatcgtcccaaacgtgggcttggaaaagtgacgattgagcgcatcatcaaa
tcagcctacgataaccatcaatcgatttatgagtacattacatgtaacgaagctgcgatt
gaaaaagaggcgacgaaaaaggcctctttggcgctgaaagagtttgtgcaaaacatcgca
cacatgcagagcattcaagaaaattcaacgtacgatatgatcgatgccattgaagaatct
tttgcgatcaaagcttactacaccaatcagcctgactcgttggatcgcctctctaacatc
gatgaattttacggacttttccgcgattatgtgaagcaaaaccctcaaatgggcgtggat
gattttttaaatgagcttgcgttgcagagcgatcaagatcagatcgatagtgaaaacatc
tccattatgagcattcatgcgagcaaaggtttggagtttgaatacctctttgtcattggt
ttggaagagggctttttccctctcataggggacggcagtgacattgaagaagaacgtcgt
cttgggtatgtggcgattacacgtgctaaaaaagagctgacactcagtttttcaggcagt
cgtttttacaaagggcgaagaacggagcttaccaaaagccgttttctcaaagaagcaggc
gtgtgcgagggaagtttgattttagaaaaaaccacctcgtttaaaaaaggcgatctggtc
aagcacaagatctttggcattggacgtataacggaagtgagcaaagtagggcgtgagttt
aaattgcagatcaattttagcggtaccaaacgggatatcttagcctcctttgtggagaag
atttag
DBGET
integrated database retrieval system
