Sulfurospirillum halorespirans: SHALO_2306
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Entry
SHALO_2306 CDS
T04475
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
shal
Sulfurospirillum halorespirans
Pathway
shal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SHALO_2306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shal03019
]
SHALO_2306
Enzymes [BR:
shal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SHALO_2306
Messenger RNA biogenesis [BR:
shal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SHALO_2306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
P-loop_SecA
HI1480
Motif
Other DBs
NCBI-ProteinID:
AOO66066
UniProt:
A0A1D7TM53
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All DBs
Position
2322573..2323829
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AA seq
418 aa
AA seq
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MLFSDLKLSPALLKAIHDEGYTTPTPVQEKAIPSILEGRDMLAGAQTGTGKTAGFTLPIL
ELLSQKPHNNKAKPLLRVLILTPTRELAAQVGESVKAYGKYLPFKSAVIFGGVGIHPQIQ
TLRSGIDILVATPGRLLDHISQGTIDLRHIDTFVLDEADRMLDMGFIKDIRRVISLLPAK
RQNLLFSATYSDDIKKLCESILKNPAIVEVARRNTSSELVNQRVIIVDCKRKTALLGKLI
NENKWEQVLVFTRTKHHANKVSEYLAKIGISSAAIHGNKSQSARTKALADFKNGSIKVLA
ATDIAARGLDIDQLPHVVNLELPNIAEDYVHRIGRTGRAGNNGEAISLVCVDEHDYLRGI
EKLINKKFEREIIEGFEPDPNIKAEPIQQGRGPKPQGQPRRRDNAPREYVEKRRERQR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttattttcagatttaaaactcagccctgcgcttttaaaagcgattcacgatgaaggc
tacacgaccccaacacccgtacaagaaaaagcgattccttccattttagaaggtcgcgac
atgcttgcaggtgcgcaaacgggtacgggaaaaaccgctggcttcaccctgcctatttta
gaacttctctctcaaaaaccgcataataacaaagccaaacctcttcttcgtgtactcatt
ctcacacctacccgtgagcttgccgctcaagttggggagagtgttaaagcgtatggtaaa
tatttaccgtttaaaagtgccgttattttcggaggcgtgggtattcatccacaaattcaa
actttgcgctctggcattgacatccttgttgcaacaccgggtcgtttgctagaccacatt
tcacaaggtacgattgatcttagacatatcgacacctttgtgcttgatgaagcagacaga
atgcttgatatgggatttatcaaagatattcgccgtgtcatttccctccttcctgcaaaa
cgccaaaacctgctcttttcagcaacttactccgatgacatcaaaaaactgtgtgagtcg
atcttgaaaaatccagcgattgtcgaagtagcacgtcgcaatacctccagcgaactcgtg
aaccaacgtgtcattattgtagattgtaaacgtaaaacggcacttttaggcaaactgatc
aatgaaaataaatgggagcaagtgttggtctttacgagaaccaaacaccatgccaataaa
gtctctgaataccttgccaaaatcggcatcagttcagccgccattcacggaaacaaaagt
caaagtgcacgtaccaaagccctcgctgattttaaaaatggttcaattaaagtgcttgcg
gctacagacatcgcagcacgcggtctggacatcgaccaactccctcatgttgtcaatctt
gaacttcctaacattgcggaagactacgttcaccgtatcggcagaacgggacgcgcagga
aataacggcgaagccatctctttagtgtgtgtggatgagcatgattatttacgtggcatt
gaaaaactgatcaacaaaaaatttgagcgtgaaatcatcgaaggctttgaacccgatcca
aacatcaaagcagaacccattcagcaaggtcgtggcccaaaaccacaaggacaaccaaga
cgcagagacaacgcgcctcgtgaatacgtcgagaaaagaagagaacgacagcgatga
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