Sphingomonas hankookensis: PPZ50_00425
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Entry
PPZ50_00425 CDS
T08811
Name
(GenBank) exonuclease domain-containing protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
shan
Sphingomonas hankookensis
Pathway
shan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PPZ50_00425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shan03400
]
PPZ50_00425
DNA repair and recombination proteins [BR:
shan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PPZ50_00425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WCP72071
LinkDB
All DBs
Position
complement(84251..85006)
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AA seq
251 aa
AA seq
DB search
MAQAQIIRVVDLETTGQAPPVHGVCEVGWQDVALGEDGRWELSGEGGQHFVNPGRPIPPV
TQAVHHILDEQVADAPWWQDIARRVLDPYPRRIALAAHRADFEQKFCTAQLTHGADWICT
WKCALRLWPDSPGFSNQMLRYWRKPYGMEHERGLPAHRAFPDAYVTAFHLRDMLNEASIA
QLLEWSRQPGLLPRVRYGPDRGRAWTEIDDDSLEGFLTDRDEDVRFTAETELARRQGGGE
VKRSRNDWLLL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcccaagcgcagatcatccgtgtcgtcgacctcgaaaccacggggcaggccccgccg
gtgcatggcgtgtgcgaagtcggctggcaggatgtcgcgctgggcgaggacgggcgctgg
gaattgtcgggcgagggcgggcagcatttcgtcaatcccggccgcccgatcccgccggtg
acgcaggcggtgcaccatatcctcgacgaacaggtcgccgatgcgccgtggtggcaggat
atcgcgcgccgggtgctcgacccctatccgcgccgcatcgcgctggcggcacatcgcgcg
gatttcgaacagaaattctgtaccgcgcagctgacgcatggtgccgactggatctgtacg
tggaaatgcgcgctgcggctgtggcccgacagcccgggcttttcgaaccagatgctgcga
tactggcgcaagccctatggcatggagcatgagcgcggactgcccgcgcaccgggcgttt
cccgatgcctatgtgaccgcgttccacctgcgcgacatgctgaacgaagcgtcgatcgcg
cagctgctggaatggtcgcgccagcccggcttgctgccgcgcgtgcgctatggccccgat
cgcgggcgggcatggaccgagatcgacgacgactcgctcgaagggttcctgaccgaccgc
gacgaggacgtccgcttcaccgccgagaccgaactggcgcggcggcagggcggcggcgag
gtcaagcgcagccgcaatgattggctgctgctgtga
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