Sphingomonas hankookensis: PPZ50_01290
Help
Entry
PPZ50_01290 CDS
T08811
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
shan
Sphingomonas hankookensis
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shan02000
]
PPZ50_01290
Transporters [BR:
shan02000
]
Other transporters
Pores ion channels [TC:
1
]
PPZ50_01290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WCP72228
LinkDB
All DBs
Position
complement(258040..259968)
Genome browser
AA seq
642 aa
AA seq
DB search
MKTRFLLLPCLLAATPSFAQSAQSTTGLERVADGDDEIVVTANREARPVDTVGQAVTVLD
TATIETRQAVVVSDLLRQTPGVTVTRNGGIGTTTSVNIRGADSDQTVALIDGVKLNDPSS
PGGGFNFGNLLIGNIARIEVLRGAQSVLWGSQAIGGVVNLITRQPTEELAINARAEGGSF
GTGQAFANVSGKSGAVSASLGGGFFTTDGISAYAPGREKDGYRNYGANGSVAVALADNVS
VDVRGFYSNGRTEIDGFPAPTFSFGDTREVGNAEQWTGYTGLNAALFDGRFRNRIGYAHT
SSNRTNTDPDGTPTETFRGKGRNDRIDYQGSFDVTDAVFATFGVEREVSRFTTASFGGPA
TTGRARLFGVYGQLAVTPIENLTLTGGVRHDDHNVFGGATVFSGSGVWSPNGGNTLLRAS
YSEGFKAPTLYQLQSEYGNALLTPERSHGWDAGITQRGLDGAVEASATWFDRTSKDLIAF
ISCPANGTGICAGRPFGTYDNIQRAEAKGLEFALKLKPVEAFTVAAAYTYLDAQNRSAGT
ANFGRKLQRRPADSLTVNADYRWAFGLSTGATVTMVGDSFDNASNTRRLDGYVLTDLRAA
LPITERVEVYGRVENLFDERYQTIFQYGTPGRAAYGGVRVRY
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaagacccgtttcctgttgctgccctgcctgttggcagcgaccccgagtttcgcgcag
agcgcccagtcgaccaccggcctcgaacgcgtggcggacggcgatgacgagatcgtcgtc
accgcgaaccgcgaggcacgcccggtcgataccgtggggcaggcggtcaccgtgctcgac
accgcgaccatcgaaacccggcaggcggtggtcgtgtccgacctgctgcgccagacgccc
ggcgtcaccgtcacccgcaatggcggtatcggcacgacgaccagcgtcaacatccgcggc
gccgacagcgatcagaccgtcgcgctgatcgatggcgtgaagctcaacgacccgtcgtcg
cccggcggcggcttcaacttcggcaatctgctgatcggcaacatcgctcgcatcgaagtg
ctgcgcggtgcgcagtcggtgttgtggggcagccaggcgatcggcggcgtcgtcaacctg
attacccggcagccgaccgaagaactggcgatcaacgcccgcgcggaaggtggatcgttc
ggcaccgggcaggcctttgccaacgtgtcgggcaagtcgggggcggtatcggcaagcctg
ggcggcgggttctttaccaccgacggcatttcggcctatgcgccgggacgcgaaaaggac
ggctatcgcaactatggcgcgaacggcagcgtcgcggtggcgctggccgacaatgtctcg
gtcgatgtgcgcggcttctattcgaacggccggaccgagatcgacggctttccggcgccc
acgttcagcttcggcgatacccgcgaggtcgggaacgcggagcaatggaccggctatacc
gggctgaacgccgcgctgttcgacgggcggttccgcaaccgcatcggctatgcccatacg
tcgagcaaccgcaccaacaccgatcccgacggcacgccgaccgaaaccttccggggcaaa
gggcgcaacgaccggatcgactatcagggatcgttcgacgtcaccgacgccgtcttcgcg
accttcggcgtggaacgtgaagtgtcgcgcttcaccacggcgagcttcggcgggccggcg
acgaccggtcgtgcgcgcctcttcggggtctatggccagctggcggtgacgccgatcgaa
aacctcacgctgaccgggggcgtgcgccatgacgatcataatgtgttcggcggagcgacg
gtgttttcgggcagcggtgtctggtcgccgaacggcggcaatacgctgctacgcgccagc
tattcggaagggttcaaggcgccgacgttgtaccagctgcagagcgaatacggcaacgcg
ctgctgaccccggaacgctcgcacggctgggacgccggcatcacccagcgtgggctggac
ggtgctgtcgaggcgagcgcgacctggttcgaccgcacgtcgaaggacctgatcgcgttc
atctcctgccccgccaacggcaccggcatctgcgccgggcggccgttcggcacctatgac
aatatccagcgcgccgaggcgaaggggctggaattcgcgctgaagctgaaacccgtcgag
gcgttcaccgtcgccgccgcctatacctatctggatgcgcagaaccgctcggccgggact
gccaatttcgggcgcaagctgcagcggcgcccggcggacagcctgaccgtcaatgcggac
tatcgctgggcgttcggcctgtcgaccggggcgaccgtcaccatggtcggcgacagtttc
gacaatgcgtcgaacacccgccggctggacggctatgtcctgaccgacctgcgcgcggcg
ttgccgatcacggagcgggtcgaggtctatggccgggtcgagaatctgttcgacgaacgc
tatcagaccatcttccagtatggcacgccgggccgtgccgcctatggcggcgtgcgggtc
cgttactga
DBGET
integrated database retrieval system
