Sphingomonas hankookensis: PPZ50_02125
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Entry
PPZ50_02125 CDS
T08811
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shan
Sphingomonas hankookensis
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shan03016
]
PPZ50_02125 (truB)
Enzymes [BR:
shan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PPZ50_02125 (truB)
Transfer RNA biogenesis [BR:
shan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PPZ50_02125 (truB)
Prokaryotic type
PPZ50_02125 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WCP72385
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All DBs
Position
complement(432398..433405)
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AA seq
335 aa
AA seq
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MHGWIIIDKPLGPGSTQVVSAVKRALREGGYGKHKVGHGGTLDPLASGVLPVAIGEATKL
AGRMLDASKRYDFTIRFGTQTDTLDLEGKVIAESAVRPTLAAVEAVLARFTGPIEQVPPA
YSALKIDGERAYDLARKGEEVVLATRKVTVFSLQILPGTGRGTSEAGEGGSPRNATAVDV
ASPLPPPTAPAVPLPVSGKELEEITLSAFVSKGTYIRSLARDIALALGTVGHVTMLRRTK
AGPFTLQSAISLDKLAELGKGHALEETLLPLGAGLDDIPALSLDPDQAGRLRKGLRLIGF
AADDGLGFATLDDVPVALVETEGGETRVVRGFNLE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcacggctggatcatcatcgacaaaccgctggggccgggatcaacgcaggtcgtttcg
gcggtcaagcgggcgctgcgcgagggcggctatggcaagcacaaggtcggccatggcggt
acgctcgacccgctggcaagcggcgtgctgccggtcgcgatcggcgaggcgacgaagctt
gccgggcggatgctcgatgcgtcgaagcggtacgatttcaccatccgcttcggcacgcag
accgatacgctggacctggaggggaaggtgatcgccgaatcggcggtgcggccgacgctc
gcggcggtcgaggcggtgctggcgcgcttcaccggaccgattgagcaggtgccaccggcc
tattcggcgctgaagatcgatggcgagcgtgcctatgacctcgcgcgcaagggtgaggag
gtggtccttgcgactcgcaaggtgacggtgttctcactgcaaatcctccccggcacgggg
agggggaccagcgaagctggtgaagggggatcgcctcgcaacgcaaccgctgtggatgtc
gccagcccccttccacccccgactgcgccggcggtccccctccccgtgagcgggaaggag
ctggaggaaatcaccctctcggccttcgtttccaagggcacgtacatccgctccctcgcc
cgcgacatcgccctcgcactcggcacggtcggccatgtcaccatgctccgccggaccaag
gccgggccgtttaccctccaatcggccatttcgctggacaaactggcggaattgggtaag
ggccacgcgcttgaagaaacgctcctgccactgggggcggggctggacgacatcccggct
ctgtccctcgaccccgatcaggcagggcggctccgcaaggggcttcgactgatcgggttt
gcagcggacgacggtctgggcttcgcgacactggacgatgtgccggtggcgctggtcgag
accgaaggcggggaaacccgtgtcgtccgcggcttcaacctcgaatag
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