Sphingomonas hankookensis: PPZ50_02910
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Entry
PPZ50_02910 CDS
T08811
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
shan
Sphingomonas hankookensis
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shan03400
]
PPZ50_02910
DNA repair and recombination proteins [BR:
shan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PPZ50_02910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
ResIII
TrwB_AAD_bind
FtsK_SpoIIIE
AAA_10
AAA_22
AAA_16
CbiA
AAA_7
Hydrolase
T2SSE
nSTAND3
AAA_6
Motif
Other DBs
NCBI-ProteinID:
WCP72529
LinkDB
All DBs
Position
585881..587548
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AA seq
555 aa
AA seq
DB search
MTDTELFIGATADGIRQSLVLKRANRHGLIAGATGTGKTVTLQGLAENFSAAGVPVFVAD
VKGDLSGIAMAGSATAKPHAAFAERAAAIGDSDWQYRDTPVVFWDLFGEAGHPIRATVSE
MGPVLLGRMLNLNDVQDGVLTIAFHVADAEGLLLLDLDDLQAMLAHVAERADELTTRYGN
VSKQSVGAIQRALLQLRGQGGDRFFGEPALDLADFMRVADDGRGIVSVLAADKLMASPRL
YATFLLWLLSELFETLPEVGDPDKPKLVFFFDEAHLLFDDAPDALVDKVEQVVRLIRSKG
VGIYFVTQNPIDIPDAIAGQLGNRVQHALRAFTPKEQRAIRAAAETFRPNPRLDVAQAIT
ELKTGEALVSVLQADGSPSPVERTLIRPPRSRVGPVTAVERGILMQTDAVGDRYDTAIDR
ESAAELLGAKADEAAAAAAATKAQAAADKEAALKAKEDARLAKEAERQRIADQRATDRAA
REDERAARAAEREAANNPWTRATQSATRSAGSAVGRIVVNEIGKQVFGTTRGGRAKSGGL
VGGLLRGVLGGLFRG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgaactctttatcggcgctaccgccgacggcatccgccagtcgctggtc
ctgaaacgcgccaatcgccacggcctgatcgccggcgcgaccggtaccggcaagacggtg
acgttgcaggggctggccgagaatttctccgccgccggggtgccggtgttcgtggcggac
gtgaagggcgacctgtcgggcatcgccatggcgggcagcgccaccgccaagccccacgcc
gcctttgccgaacgcgccgccgcgatcggtgacagcgactggcagtatcgcgacaccccg
gtcgtgttctgggacctgttcggcgaggcgggccatccgatccgcgccaccgtgtcggaa
atggggccggtgctgcttgggcgcatgctcaacctgaacgacgtgcaggacggggtgctg
accatcgccttccatgtcgccgacgcggaagggctgctgctgctcgacctcgacgatttg
caagcgatgctggcgcatgtcgccgaacgggcggacgaactgaccacccgctacggcaat
gtcagcaagcaatcggtcggtgcgatccagcgcgcgctgctgcagctgcgggggcagggc
ggcgaccgcttcttcggcgaaccggcgctcgacctggcggacttcatgcgcgtcgccgac
gatgggcgcggcatcgtatcggtgctcgccgccgacaagctgatggcgtcgccccggctc
tacgccaccttcctgttgtggctgttgtccgaattgttcgaaacgctgcccgaggtgggc
gaccccgacaagccgaagctggtgttcttcttcgacgaggcacatctgctgttcgacgat
gcgcccgacgcgctggtcgacaaggtggaacaggtcgtccgcctgatccggtcgaagggc
gtcggcatctatttcgtgacgcagaacccgatcgacattcccgacgcgatcgccggacag
ttgggcaaccgcgtgcagcatgcgctgcgcgccttcacgcccaaggaacagcgcgcgatc
cgcgccgccgccgaaaccttccgccccaatcccaggctggacgtggcacaggccatcacc
gaactgaagaccggcgaggcgctggtgtcggtattgcaggccgatggttcgcccagcccg
gtcgaacgcacgttgatccggccgccccgctcgcgcgtcgggccggtcacggcggtcgaa
cgcggcatcctgatgcagaccgacgcggtcggcgaccgctacgacaccgcgatcgatcgt
gaatccgccgccgagctgctgggcgccaaggccgacgaggctgccgccgccgccgccgcg
accaaggcgcaggccgccgccgacaaggaagccgcgctcaaggcgaaggaggacgcccgc
ctcgccaaggaagcagagcgccagcgcatcgcagaccaacgcgctaccgaccgtgccgcg
cgcgaggacgaacgcgccgcgcgtgctgccgagcgcgaggcggcgaacaacccatggacc
cgcgccacgcaatcggcgacccggtcggccgggtcggcggtcgggcgcatcgtcgtcaac
gagatcggcaagcaggtgttcggtacgacgcgcggcggtcgcgccaagagcggcggactg
gtcggcgggctgctgcgcggcgttctgggcgggttgttccgcgggtaa
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