Sphingomonas hankookensis: PPZ50_04575
Help
Entry
PPZ50_04575 CDS
T08811
Name
(GenBank) TrmH family RNA methyltransferase
KO
K02533
tRNA/rRNA methyltransferase [EC:2.1.1.-]
Organism
shan
Sphingomonas hankookensis
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shan03016
]
PPZ50_04575
Transfer RNA biogenesis [BR:
shan03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PPZ50_04575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
WCP72831
LinkDB
All DBs
Position
complement(945118..946176)
Genome browser
AA seq
352 aa
AA seq
DB search
MSFATYMLHCADGKYYVGHTDDLERRIAQHQSGEIPGFTASRLPVELVWSESFPTREEAV
AAETRLKGWSRAKKKALIGADWATVSALARKSFDTGLRQAQPLLRTNGEKAEDVGKPPVI
VLVRPQLGQNIGKAARAMLNFGLVEMRLVAPRDGWPNPEAGPAASGADQVLRDATVYDTV
AEAVADCAHVYATTVRKRGITKPVVTPEAAAQAIRAEPGRSAILFGPERSGLETDDVALA
RTILTVPINPEFGSLNLAQAVILVAYEWSKGEGLASPPTVDLGAPAPHQELEGMIGQLDD
MLEAARFFYPPERAATSRRTLRTLLTKAGWTSQEVRTMRGVLSALDGAKRRR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgccacgtacatgctccattgcgccgacggaaaatattatgtcgggcatacg
gacgatctggaacggcggatcgcacagcatcagtccggcgaaattccgggttttactgcc
agccggctgcccgtcgaactggtctggagcgagagcttccccacgcgcgaggaagcagtc
gccgccgaaacccgcctgaagggatggtcgcgtgcgaagaaaaaagcgctgataggtgcc
gattgggctaccgtcagcgcgcttgcccgcaagtccttcgatacgggtcttcgacaggct
cagcccctactcaggacaaacggcgagaaagccgaagatgtcgggaagccacccgtcatc
gtcctcgtccgcccgcaactcggccagaatatcggcaaggccgcgcgcgccatgctgaac
ttcggcctcgtcgaaatgcgcctcgtcgccccgcgcgacggctggcccaatcccgaagcc
ggccccgccgccagcggcgccgaccaggtgctgcgtgacgccaccgtctacgacaccgtc
gccgaagcggtcgccgactgcgcgcatgtctacgccaccaccgtccgcaagcgcggcatc
accaagccggtcgtcaccccagaagccgccgcgcaggcgatccgcgccgaaccgggccgc
tcggcgatcctgttcggccccgaacgctccggcctcgaaaccgacgacgtcgcgctggcc
cgcaccatcctgaccgtaccgatcaaccccgaattcggctcgctcaacctcgcccaggcg
gtgatcctcgtcgcgtacgaatggtcgaagggcgaagggctggccagcccgccgaccgtc
gacctgggcgcccccgccccgcaccaggagttggagggcatgatcggccagctcgacgac
atgctggaagccgcgcgcttcttctatccccccgaacgcgcggcgacctcgcgccggacg
ctcaggacgctgctgacgaaggccggctggacgtcgcaggaagtgcggacgatgcgcggg
gtgctgtcggcgctggatggggcgaaacggcggcgataa
DBGET
integrated database retrieval system
