KEGG   Sphingomonas hankookensis: PPZ50_04770
Entry
PPZ50_04770       CDS       T08811                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
shan  Sphingomonas hankookensis
Brite
KEGG Orthology (KO) [BR:shan00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shan02044]
    PPZ50_04770 (tssC)
Secretion system [BR:shan02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PPZ50_04770 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 GPAT_C DUF6781 DAP3 DUF7284
Other DBs
NCBI-ProteinID: WCP72868
LinkDB
Position
985674..987161
AA seq 495 aa
MAQEAFSQSNDTAPATSEEVSDFQALLQKEFKPATEERRSRIEQAVQTLAEQALSNAQIV
GGDVFATVDAMRAAIDRKLTEQINQIIHHPEFQAMESAWRGLNYLVMNTSTGKDMKIRVM
NMSKEEARRMFRQYRDAAWDQSPLFKKIYENEFGQLGGQPYGAFVCDYSFDHSAPDLEVM
RGLSRIGAAAHAPFIAAAAPSLLGMDSWTELSNPRDLGKLFDATDYGAWRSFRASEDSRY
LALTLPRFLGRPLYGAKTEPVEEFDFEEDAGGAHDHHLWLNAAYAMGTRITEAFNTYGWT
TRIRGVESGGTVEELPTAAFPTDEGGIDYKCPTEIAISDRREAELSAAGLMALVHRKNTD
QATFIGAQTVHRPAAYDKKEATANANLSARLPYIFASCRFAHYLKCMVRDWVGGSREAEQ
LQRDLNNWVLQYVDGSPTTSNEETKARLPLKQAKIEVIPDEENPGYYKGKFMFVPHYQLE
GMDVALSMVSRLPKS
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggcccaggaagccttcagccagagcaacgacaccgcgcccgccacttcggaagaagtg
agcgatttccaggcgctgctgcaaaaggaattcaagcccgcgaccgaggaacgccggtcg
cgcatcgaacaggcggtgcagacgctggccgaacaggcgctgtcgaacgcgcagatcgtc
ggcggcgacgtgttcgcgacggtcgacgcgatgcgcgcggcgatcgaccgcaagctgacc
gaacagatcaaccagatcatccaccatcccgaattccaggcgatggaatcggcatggcgc
ggcctcaactacctcgtcatgaacacctcgaccggcaaagacatgaaaatccgcgtgatg
aacatgtcgaaggaagaggcgcggcggatgttccgccagtatcgcgacgcggcgtgggat
cagagcccgctgttcaagaagatctacgagaacgagttcggccagctgggcggacagccc
tatggcgcgttcgtctgcgactacagcttcgaccatagcgcccccgatctggaggtcatg
cgcgggctgtcgcggatcggggccgcggcccatgcgccgttcatcgccgccgccgcgccg
tcgctgctgggcatggacagctggaccgagctgtcgaacccgcgtgatctgggcaagctg
ttcgacgcgaccgattacggcgcatggcgttcgttccgcgcgtcggaggacagccgctat
ctggcgctgaccctgccgcgcttcctcgggcgtccgctatacggtgccaagaccgaaccg
gtcgaggaattcgatttcgaggaggatgccggcggcgcgcacgaccatcatctgtggttg
aacgccgcctatgcgatgggcacgcgcattaccgaagcgttcaacacctatggctggacc
acccgcatccgcggcgtggaatcgggcggcaccgtggaggagctgccgacggcggccttc
ccgaccgacgagggcggcatcgattacaaatgcccgaccgaaatcgccatttccgaccgg
cgcgaggcggagctgtccgccgccgggctgatggcgctggtccatcgcaagaataccgac
caggcgacgttcatcggcgcgcagaccgtccaccggcccgccgcctatgacaagaaggaa
gcgaccgccaacgccaatctgtcggcgcgcctgccctatatcttcgccagctgccgcttt
gcacattatctgaagtgcatggtgcgcgactgggtcggcggatcgcgggaagccgaacag
cttcagcgcgatctcaacaattgggtcctccaatatgtcgacggttcgccgacgacgtcg
aacgaggagaccaaggcccgcctgccattgaagcaggccaagatcgaggtgatcccagac
gaggagaacccgggatattacaaggggaagttcatgttcgtgccgcactaccagctcgaa
gggatggatgtggcgctaagcatggtttcacgcttgcccaagtcctga

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