KEGG   Sphingomonas hankookensis: PPZ50_04775
Entry
PPZ50_04775       CDS       T08811                                 
Name
(GenBank) type VI secretion system tube protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
shan  Sphingomonas hankookensis
Pathway
shan03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shan00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PPZ50_04775
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shan02044]
    PPZ50_04775
Secretion system [BR:shan02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PPZ50_04775
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: WCP72869
LinkDB
Position
987212..987706
AA seq 164 aa
MAVDLFLKIDGVQGESSKKNHQGEIDIISFDFGAVQHGSFHSGGAGGGSGKAEISDIRIQ
KEVDKSSPLLFKHCASGKHIKEAIIYSQKAGDGNNPLTYYKIKLEDIIVSDIHNNGASGG
DAIMESVTFNCAKVTFDYQAQNAQGGKDGGVVTAYYDIRQNEAG
NT seq 495 nt   +upstreamnt  +downstreamnt
atggcagtcgatctgtttctcaaaattgacggtgtccagggtgaatcgtccaagaagaac
caccagggcgaaatcgatatcatctcgttcgatttcggcgcggtgcagcatggttcgttc
cacagcggcggcgccggcggtggttcgggcaaggccgaaatctccgacatccgcatccag
aaggaagtcgacaagtcgtcgccgctgctgttcaagcattgcgcttcgggcaagcacatc
aaggaagcgatcatctattcgcagaaggcgggcgacggcaacaacccgctgacctattac
aagatcaagctcgaagacatcatcgtgtccgacatccataacaacggggcgtcgggcggc
gatgcgatcatggaatcggtcacgttcaactgtgcgaaggtgacgttcgactatcaggcg
cagaacgcgcagggtggcaaggacggcggcgtcgtcaccgcctattacgacatccgccag
aacgaggcgggctga

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