KEGG   Sphingomonas hankookensis: PPZ50_04810
Entry
PPZ50_04810       CDS       T08811                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
shan  Sphingomonas hankookensis
Pathway
shan03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shan00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PPZ50_04810 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shan02044]
    PPZ50_04810 (tssH)
Secretion system [BR:shan02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PPZ50_04810 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_22 Clp_N AAA_16 NBD_SMAX1 Sigma54_activat AAA_7 TniB AAA_24 NACHT nSTAND3 AAA_18 AAA_33 AAA_30 AAA_25 Zeta_toxin SRP54 AAA_6 bHLH_SAC51
Other DBs
NCBI-ProteinID: WCP72876
LinkDB
Position
993531..996155
AA seq 874 aa
MTDISRTALFGRLDASALQAIESATGFARMRGNPYVELVHWLHLLVQDSTGDIAAIRAAF
GIDDAVLARDIVGALDILPRGASAISDFAPQVEEAIEKGWLYASLQFGAGKVRTGHLLYG
MLRTPTLRNALFATSGEWRKIAADRLGAEFDAIVKPSAETTSVASIEPGAPAAASGPAPA
GEALARYSSDLTAKARAAEIDAVVGRDGEIRQLIDVLLRRRQNNPILIGEAGVGKTAVVE
GFARRIADGDVPPALKGVTLRALDVTLMQAGAGVKGEFEKRLRQVIDEVEGAASPVILFI
DEAHTLVGAGGQAGTGDAANLLKPALARGRLRTIAATTYAEYRQYFEKDPALTRRFQPVD
VAEPETDVAVDMLRSVVGAMEQHHGVVVLDEAVSAAVTLSQRYVPARQLPDKAVSLLDTA
AARVAVSQHATPAAVEDRRRRLELLEAERGVVERETQQRYRRDDRLAELDEAIEEARAAV
EAVETKWTAEREALDAVRAAREGDDGDALDAALTAAREAAGDDPMVFGVVDGDAIAAVVG
DWTGIPVGRMVKDEIESVLTIGTALKARVIGQDHAMDAIAKRIQTSRAKLDNPAKPVGVF
MLCGPSGVGKTETAHALSELLFSGDDSMIVINMSEFQEAHTVSTLKGAPAGYVGYGQGGV
LTEAVRRRPYSVVLLDEVEKAHPDVHEMFFQVFDKGFMNDAEGRHIDFRNTVILLTSNVG
TDLIATLTEDEETAPTPDALATALRPELLKVFPPALLGRLSVLPYYPLSKDMLAGIVRLH
LGRIERRIRDNHGIALTIDPAVVDHIVERCTEAASGGRMIDAILTNSMLPDMSVALLERR
MRGDEVRSIAVAVDGDALTYRFDGASGAADGAVA
NT seq 2625 nt   +upstreamnt  +downstreamnt
atgaccgatatcagccgtaccgccctgttcggccgcctcgacgccagcgcgctgcaggcg
atcgaatccgccaccggcttcgcccggatgcgtggcaacccctatgtcgagctggtccat
tggctgcatctgctggtccaggattcgaccggcgacattgccgcgatccgggcggcgttc
ggcatcgacgatgcggtgctggcgcgcgatatcgtcggtgcgctcgacatattgccgcgc
ggggcgtcggcgatctcggacttcgcgccgcaggtcgaggaggcgatcgagaagggctgg
ctctatgcctcgctgcaattcggtgcgggcaaggtgcgcaccgggcatctgctctacggg
atgctgcgcacgccgacgctgcgcaacgcgctgttcgcgacgagtggcgagtggcgcaag
atcgccgccgaccggctgggcgcggagttcgatgcgatcgtgaagccatcggccgagacg
acgtcggtcgcgtcgatcgaaccgggcgctccggcggcggcgagcggtccggccccggcg
ggcgaggcgctggcgcgctactccagcgacctgaccgccaaggcgcgtgccgccgaaatc
gacgcggtcgtcgggcgcgacggcgaaatccgccagctgatcgacgtgctgctgcggcgg
cggcagaacaacccgatcctgatcggtgaggcaggcgtcggcaagaccgcggtggtagaa
gggttcgcgcggcgcatcgccgatggcgacgtcccgcccgcgttgaaaggagtgacgctg
cgcgcactcgatgtgacacttatgcaggccggcgcgggcgtgaagggcgagttcgagaag
cggctgcgccaggtgatcgacgaggtcgagggcgcggccagcccggtgatcctgttcatc
gacgaagcgcatacgctggtcggcgcgggcgggcaggcggggacgggcgacgccgccaat
ttgctgaaaccggcgctggcgcgcgggcggctgcgcaccatcgccgccacgacctatgcc
gaatatcgccagtattttgaaaaggacccggcgctcacccgccggttccagccggtcgac
gtggccgagccggagacggatgtcgcggtcgacatgctgcggtcggtggtcggggcgatg
gagcagcatcacggcgtcgtcgtgctcgacgaagcggtgagcgcggcggtcaccctgtcg
cagcgttacgtgcccgcgcggcaactgcccgacaaggcggtcagcctgctcgacaccgcc
gccgcgcgcgtcgcggtgtcgcagcacgccaccccggcggcggtcgaggaccggcggcgg
cggctggaactgctggaggcggaacgcggcgtcgtcgagcgcgagacgcagcaacgttat
cgccgcgacgaccggctggctgaactggacgaggcgatcgaagaggcgcgggctgcggtc
gaggcggtcgagacgaaatggaccgccgagcgcgaggcactggacgcggtacgtgccgcg
cgggagggcgatgacggcgatgcgctggatgctgcgctgacagctgcgcgtgaggcggcg
ggcgacgatccgatggtcttcggcgtggtcgatggcgatgcgatcgcggcggtcgtcggc
gactggaccggcatcccggtcgggcggatggtcaaggacgagatcgaaagcgtgctgacg
atcggcaccgcgctgaaggcacgggtgatcggccaggatcatgcgatggacgccatcgcc
aagcgcatccagaccagccgcgcgaaactggacaatccggccaagccggtcggcgtgttc
atgctgtgcggcccgtcgggcgtcggcaagaccgagaccgcgcacgcgttgtccgagctg
ctgttttccggcgacgattcaatgatcgtcatcaacatgagcgagtttcaggaggcgcat
accgtctcgacgctgaagggcgctcctgccggctatgtcgggtatgggcagggcggggtg
ctgaccgaagcggtgcggcggcggccctattcggtggtgctgctcgatgaggtcgagaag
gcgcaccccgacgtccatgagatgttcttccaggtgttcgacaaggggttcatgaacgat
gccgaggggcggcatatcgatttccgcaacacggtgatcctgctgacctccaatgtcggg
accgacctgatcgcgacactgaccgaggatgaggaaacggcgccgacgcccgatgcgctg
gcgacggcgctgcgccccgaattgctcaaggtgtttccgccggcgttgctggggcggctg
tcggtgctgccctattatccgctgagcaaggacatgcttgcggggatcgtccggctgcat
ctcggccggatcgagcggcgcatccgcgacaatcacggcatcgcgctcaccatcgatccg
gcggtggtcgaccatatcgtcgaacgctgcaccgaagcggcgtcgggcggacggatgatc
gatgcgatcctgaccaattcgatgctgcccgacatgtcggtcgcgctgctcgaacggcgg
atgcgcggggacgaggtgcgctcgatcgcggtcgcggtggatggcgacgcgctgacctat
cggttcgatggtgcttccggcgcggcggatggggcggtcgcgtga

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