Sphingomonas hankookensis: PPZ50_04840
Help
Entry
PPZ50_04840 CDS
T08811
Name
(GenBank) filamentous hemagglutinin N-terminal domain-containing protein
Organism
shan
Sphingomonas hankookensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Motif
Other DBs
NCBI-ProteinID:
WCP72882
LinkDB
All DBs
Position
1000229..1007149
Genome browser
AA seq
2306 aa
AA seq
DB search
MPVVATARRLRAALVLTTACGALFPALAVAQSAQVRLPTESDVRDVRTDGLRPDFKDSSN
RLRVDLRGRNTVIDWNGFNIPESKEVNFTDGRLLGGLRGDIAVLNRDVSGNPSQLLGKLT
SDANVAVWVHNANGILVGSKAAFNTGSLVLTTLDISPEDFVRAGDSYRLQASAGSQSAIT
VEQGAKLRVDGSTRGLVMLAPKIDAHGEFVAEGQDVAFVTASDVTLDYRSGSPLSVTINR
GSAVAGTSQYVRGTVAGNNAIFALASQDTLTDSLLQVSAAVTTASAGSRGIVLSAGKPAA
AVNGVTVAGDAAATGGVARLLVDGALRADNRDADIVAGASGSASFGGAVQTRDDFSVASG
GALSIAGNVTAGGDVLLSGRGVTLGATDPVTQRAGGQFRVSSTDGDIVGIGTVTLRSGDT
GDDGLLLETLGSSAGNIRLGSRSRLIAGDDRRGGLTLARRDGATAIDIGSVEARALRGAV
GSGAIGTGDVNLREALSIGGSTIVTGDLASDRAIDVRGSGAVTTGGIDSGAGATVVAGTA
LTVGGDVAASDGVSLRGGSVTLGGSALRSGGGIDVTALTGGITGSRALAIASGSSRRSDV
IKLQAAGADGIVLADGSTITGGTNRALDVRVFTASEAPLKLGDVTARSLGTIATLDGDTG
PGGAFRSAGSLTFGRLDLVDGFAAESTGGNLTVGRIAVSGALQGIDLRAAGTLSVQSDIS
TSGAVTLASGTALTLGTIESRDRAVTLTSGGTLRAGRVSGATGVTASGTAVTLGDVRGGT
GAVTLGATSGDLSVASAAGRRVALDAGGGIGVTGTLTADAGAVELNAGGAIAVAGTIRST
GGNVRVVSTGGSVGVTGGLTSDGAATLSGTAITLGGTQTARGAYSATASAGGITRSGNAL
SIRADSDATGGEGVTLGATGGAIDLGDSRIDAGGTVRLTTDGQGITIGGVQAAGLVATGA
TTTGAAIRTGDLRLGGPATLRAAGDVTTGAINTDGAVTLGGNAVRFGNARAASLSAIAAG
GVVTGGNIDTSGDVQVQAANGVLTLGRIATTGGDVALGALGPVFVQGVASAGTASVIGTG
AGNDVSVADGVAANGAVTVRSGRDIRTPFVRSATGALTVAAPNGRLAGFVTGTGTSLSAG
AGQPFSLTVGTDAVLGDVVGGNISITATAITANRIDGGSLPVALRATVGDLTVSGPVTGS
TVSLTAAGRALLGSVDASGAVTLGGAQGLSFGRVSGASIDASGGAIRGDALSSTGAITLS
GADVTLDRIDAGTLTADATGTLAIGTIEATGDAVLTGASGNFGDVTAGGALGITTSGATR
FGRLTGQSIAATARGGALIGTAVVARGNATLTGQSIDLGLAESGGSLSAKSDAALAIGTV
RATGDATLTGATGTFGTVTAGGALGLSTTGATRFDQLTGQTVTATAQGGALNGTAVVARG
NATLAGQSIDIGSVDSGGALSATTGGALTLGTGKAVGDAVLSAGTTGNLGTVTAGGALRA
TSAGALRFDRLAGRAVTAASQGGALSGGTVSATGDVTLGGQSIAVGPVAGAGSLAADSTA
GALQLGAVAMGGNVTVRASGAATLANGVTAGGAYRVTAGSIALGGEQQAGGEVRLSATNG
AIGGASGLTLVSGTAGGTAPIILDATAGIDLSGASLRTGAGSALALRAGRGQAIRLGSVE
AGSLGGFDGSAPVDRLTHDGSVTTGDLTVGRMAVTLSSGDLTTGRISATGPVSLIASSGS
VRGGDLTAGTLEAKAGSTLALGTATVGGTATLEAGNIDLRALTAQALTIKTAGTLGAGNG
GATALRTTGGDLTVEAGTARLASVESAGSATLRGTAVEVRDRLSAARALLVEARSALTLQ
NAAAGGDVSLASTGAVNAGEVSAGGALSVDGAGVTLGAVRAGGALKATSSGGLSLASGSG
NGITLDAVGLVRAGALSGGPSIAIRGADAELSGAIRGSSVRFATRDPATTALRIGDGTQA
NGFRLSAAEVAQVAADSVAFDGGAGAMEIGSVALAPSVGRSVEMLSTGDVRVTGQVSATG
AGRSIRIGGDGANGNAATIHLIATSDAGGRLLVGDNDLDLRGNRIAAGLSTGFLDTLQPG
DAGRAQAQALIGNPNSALYNTQLGGGFFAPDATTMIAARSLTVRFGDYALFQNTAVPGRS
SGVSVGSLTAPVTPALRIATYGTPAAASFAFFGDINGITGAGAALLGNPVIDIQPQLLPN
SRINGCLAGSGAGCLTTIVIQPTLQVFDWDSQAVFGILQDVSLPFTPIIGGNNEALLSGL
PALVPETPADAAAPAPTVVPSQEPKP
NT seq
6921 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgtcgccaccgcccgccgccttcgcgccgctctcgtgctcaccaccgcctgc
ggggcgctgttcccggcattggcggtggcgcagagcgcgcaggtgcggttgccgaccgaa
agcgacgtgcgcgacgtacggaccgacgggctgcggccggatttcaaggacagcagcaac
cggttgcgcgtcgacctgcgcgggcggaacaccgtcatcgactggaacgggttcaacatc
cctgaaagcaaggaggtcaacttcaccgacggccggctgctcggcgggctgcgcggggat
attgcggtgctgaaccgtgacgtgtcgggcaacccatcgcaactgctcggcaagctgacc
agcgatgccaatgtcgcggtgtgggtgcacaatgcgaacggcatcctggtcgggtcgaag
gcggcgttcaacaccgggtcgctggtgctgaccacgctggacatatcgcctgaggatttc
gtgcgggcaggcgacagctatcggttgcaggccagcgcaggcagccagtcggcgatcacc
gtcgaacagggcgcgaagctgcgcgtcgacggcagcacgcgcgggctggtgatgctggcc
cccaagatcgacgcgcatggcgagttcgtggcggagggacaggatgtcgccttcgtcacc
gccagcgacgtgacgctcgactatcgttcgggcagcccgttgtcggtgacgatcaaccgg
ggcagcgcggtcgcgggcaccagccaatatgtgcgcggcacggtggcgggcaacaacgcc
atcttcgcgctggcatcgcaggatacgctgaccgattcgctgctgcaggtgtcggcggcg
gtgaccaccgccagcgccgggtcgcgcgggatcgtcctgtcggcgggcaagccggcggcg
gcggtcaacggcgtgacggtcgcgggcgatgcggcggcgaccggcggcgtcgcccggctg
ctggtcgacggcgcgctgcgcgccgacaatcgcgacgcggacatcgtcgccggcgccagc
ggttcggcgagctttggcggcgcggtgcagacccgcgacgacttttcggtcgcatcgggc
ggggcgctgagcatcgccggcaacgtcaccgccggtggcgacgtgctgctgtcgggacgc
ggcgtgacgctgggcgcgacggacccggtgacgcagcgcgcgggtggccagttccgcgtc
agttcgaccgatggcgatatcgtcgggatcggtacggtgacgctgcggtcgggtgatacc
ggtgatgacggcctgctgctcgaaacgctgggtagcagcgcggggaatattcggctggga
agccgcagccggttgatcgcgggcgacgaccggcgtggcgggctgacgctggcgcggcgg
gacggtgccactgcgatcgatatcggatcggtcgaggcgcgggcactgcgcggcgcggtg
ggcagcggtgcaatcggcaccggcgatgtgaacctgcgcgaggcactgtcgatcggcggg
tcgaccatcgtcacgggcgatctggcatccgaccgcgcgatcgacgttcgcggcagcggc
gcggtgacgaccggcgggatcgatagcggtgcgggtgcgaccgtggtcgcgggcactgcg
ctgactgtcggcggcgatgttgcggcatccgacggcgtcagcctgcgcggcggttcggtc
acgctgggtggcagcgcgttgcgcagcggcggcgggatcgacgtcaccgcgttgaccggg
ggtattactggctcgcgcgcgctggcgatcgcgtcgggcagcagccggcgcagcgacgtc
atcaagctgcaggcggcgggtgcggacggtatcgtgctggccgatggcagcacgatcacc
ggcggcaccaaccgcgcgctggacgtccgggtctttaccgccagcgaagcgccgctgaag
ctcggcgacgtgaccgcacggtcgctgggcaccatcgcgacgctcgacggcgatacgggg
ccgggcggtgcgttccggtcggcgggatcgctgaccttcgggcggctcgatctggtcgac
ggcttcgcggcggaaagcaccggcggcaatctgacggtcggccggatcgcggtcagcggc
gcgttgcagggaatcgatctgcgcgcggcgggcacgctgtcggtacagagcgatatcagc
accagcggcgcggtgacgctggcgagcgggacggcgctgacgctcggcacgatcgagagc
cgcgaccgggcggtgacgctgaccagcggtggcacgttgcgtgcggggcgcgtgtccggc
gcgaccggcgtgaccgccagcgggacggcggtgacgctgggcgatgtgcgcggtgggacc
ggggcggtgacgctgggtgcgacatcgggcgacttgtcggtggcgagtgcggccggacgc
cgggtcgcgctggatgccgggggtggcatcggcgtgaccggcaccctgacagccgatgcc
ggcgcggtagaattgaacgcgggcggtgcgattgcggtcgcggggacgatccgcagcacg
ggcggcaatgtccgcgtcgtgtcgaccggcggtagcgtgggagtgaccggcgggctgacg
tcggacggggcggcaacgctgtcgggaacggccatcacgctcggcggcacgcagacggca
cgcggcgcctatagcgcgaccgcgtcggccggggggattacgcgcagcggcaatgcgctg
tcgatccgcgccgacagcgatgcgaccggtggcgaaggcgtcacgctgggcgcgaccggt
ggtgcaatcgacttgggcgacagtcggatcgatgccggcggcacggtgcggctgaccacc
gatgggcaggggatcacgatcggcggcgtgcaggccgccggactggtggcgaccggagcg
accacgaccggggcagcgatccgcaccggcgacctgcgtctcggcggaccggcaacgctg
cgcgcggcgggcgacgtgacgaccggcgcgatcaacaccgatggcgcagtgacgctcggc
ggcaatgcggtgcggttcggcaatgcgcgcgcggcgagcctgtcggcgatcgccgccggg
ggggtggtcaccggcggcaatatcgacacgagcggcgatgtgcaggtgcaggcggcgaat
ggcgtgctgaccctggggcggatcgcgacgaccggtggcgacgtcgcgctgggcgcgctc
ggcccggtgttcgtgcagggcgttgcgtcggctggaaccgcgtcggtgatcgggacgggt
gccggcaacgacgtgtcggtggccgatggcgtcgccgccaacggcgcggtcacggtgcga
tcgggccgcgacatccgcaccccgttcgtgcgcagcgctacgggtgcgctgacggtggcg
gcgcccaatggacgactggcagggttcgtcacgggcaccgggaccagcctgtcggcaggc
gccggccagcccttctcgctgacggtcggcaccgatgcggtgctgggcgatgtggtcggc
ggcaatatatcgatcaccgcgaccgcgatcaccgccaaccggatcgatggcggcagcttg
ccggtcgcgctgcgggcgacggtgggcgacctgacggtttccgggccggtgacgggcagc
acggtatcgctgacggcggcgggacgggcgctgctgggatcggtcgatgcgtcgggcgcg
gtgacgttgggcggggcgcaggggctgtcgtttgggcgcgtgtcgggtgcgtcgatcgac
gcgagcggcggtgcaatccgcggcgatgcgctgtcgtcgactggtgcgatcacgctgagc
ggcgccgacgtgacgctcgaccggatcgacgcggggacactgactgccgatgcgacgggt
acgctggcgatcggtacgatcgaggccacgggcgacgcggtactgaccggcgcttcgggc
aatttcggcgacgttaccgccgggggagcgctcggcatcacgacgagcggcgcgacgcgc
ttcggccggttgaccggacagagcatagccgccacggcgcggggtggcgcgctcatcgga
acggcggtggtcgcgcgcggcaacgcgacgctgaccgggcagtcgatcgatctgggtttg
gccgagagtggtggatcgctgtcggcgaagagcgacgccgcgctggcgatcggcacggtc
cgggcgaccggggatgcgaccctgaccggcgcgaccggcactttcggtaccgtcactgcc
ggcggagcactcggcctttcgacgacgggtgccacgcgcttcgaccagctgaccgggcag
acggtcacggcgaccgcgcagggcggggcgctcaatggaacggcggtggtcgcgcgcggc
aatgcgacgctggcgggccagtcgatcgatatcgggtcggtcgatagcggcggggcgctg
tcggccacgaccggcggagcattgacgctcggtaccggcaaggcggtcggcgacgcggtg
ttgtccgccggtacgaccggcaatttgggtacggtgacggccggaggcgcattgcgagcg
acgtcggccggcgcgttacggttcgaccggttggcgggacgggcggtcacggcggcgtcg
cagggcggtgcgctgagcggcggcacggtgagcgcgaccggcgatgttacgctgggcggc
cagtcgatcgcggtcgggccggtcgccggagccggctcgctggctgccgattcgacagcg
ggcgcgttgcagcttggcgcggtggcgatgggcgggaacgtcaccgtccgggcgagcggc
gcggcgacactggcgaacggcgtgaccgctggcggtgcgtatcgggtgaccgcaggatcg
atcgcgctgggcggtgagcagcaggcgggcggcgaggttcggctgagcgcgacgaacggc
gcgatcggcggggcgtcggggctgacgctggtgagcggtacggcaggcggtacggcaccg
atcatactcgacgctaccgccggcatcgacctgtcgggcgcgagcttgcgcaccggggcg
ggctccgcgctggcgctgcgggcagggcgcgggcaggcgatccggctgggatcggtcgag
gcagggtcgctcggcggcttcgacgggagcgcgccggtcgaccggctgacccatgatggc
agcgtgacgaccggtgacctgacggtcgggcgcatggcggtgacgctgagcagcggcgac
ctgacgaccggacggatcagcgcgacggggccggtgtcgttgatcgcgagcagcggttcg
gttcggggcggcgacctgacggcgggcacgctggaggcgaaggccggatcgacattggcg
ctcggtacggcgacggtcggtggcacggcaacgctggaagcgggcaatatcgacctgcgc
gcgctgaccgcgcaggcgctgacgatcaagaccgccgggacgctgggtgccgggaatggc
ggcgcgacggcgctgcgcacgaccggcggcgatctgacggtggaagcgggaacggcgcgg
ctggccagcgtcgagtccgccgggtcggcgacgttgcgcggaaccgcggtcgaggtgcgg
gacagattgtcggcggcacgggcgctgctggtcgaggcgcgttcggcgctgacgctgcag
aatgcggcggcaggcggtgatgtgtcgctcgcatcgacaggtgcggtgaatgcgggtgaa
gtgtcggcgggtggcgcgctgtcggtcgatggcgccggcgttacgttgggcgcggtgcgg
gccggcggggcgttgaaggcgaccagcagcggcggactgtcgctggcgtcgggtagcggc
aacggcatcacgctggatgcggtcgggttggtgcgcgcgggtgcgctgagcggcgggccg
tcgatcgcgatccgcggtgccgatgccgaactgtccggcgcgatccgggggagcagtgtc
cgcttcgccacgcgcgatccggcgacgaccgcgctgcgcatcggtgacgggacgcaggcc
aacggctttcgcctgtcggcggcggaggtcgcgcaggtcgcggccgacagcgtcgcgttc
gacggcggcgcgggcgcgatggagatcggcagcgtcgcgcttgccccctccgttgggcga
tcggtcgagatgctgtcgaccggcgatgtccgcgtgaccggacaggtaagcgcgaccggg
gccggccgcagcatccgcatcggcggcgatggcgcgaacggcaatgccgcgacgatccac
ctgatcgcgaccagcgatgcgggcggtcggctgttggtcggcgacaacgacctcgacctg
cgcggcaaccggatcgcggcggggctgtcgaccgggttcctcgatacgttgcagccgggc
gatgccggacgcgcgcaggcgcaggcgctgatcggcaaccccaattcggcgctgtacaat
acgcagctgggcggcggcttcttcgcgcccgatgcgacgacgatgatcgccgcgcggtcg
ctgaccgtccggttcggcgattatgcgctgttccagaatacggcggtgccggggcggtcg
tcgggcgtctccgtgggatcgctgaccgcgccggtcacgcccgcgctgcgcatcgcgacc
tatggcacgccagcggcggccagcttcgcgttcttcggcgacatcaacggcatcaccggg
gcgggcgcggcgctgctcggaaatccagtgatcgatatccagccgcaattgttgcccaac
agccggatcaacggctgtctggccgggtcgggtgccgggtgtctgacgacgatcgtcatc
cagccgaccttgcaggtgttcgattgggacagccaggcggtgttcggcattttgcaggac
gtgtcgctgcccttcaccccgatcatcggcggcaataacgaagcgttgctgagcgggctg
ccggcactagtacccgaaacgcccgccgatgccgccgcgcccgccccgaccgtcgtgccg
tcgcaggagccgaagccttga
DBGET
integrated database retrieval system
