KEGG   Sphingomonas hankookensis: PPZ50_04865
Entry
PPZ50_04865       CDS       T08811                                 
Symbol
icmH
Name
(GenBank) type IVB secretion system protein IcmH/DotU
  KO
K11892  type VI secretion system protein ImpK
Organism
shan  Sphingomonas hankookensis
Pathway
shan03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shan00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PPZ50_04865 (icmH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shan02044]
    PPZ50_04865 (icmH)
Secretion system [BR:shan02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PPZ50_04865 (icmH)
SSDB
Motif
Pfam: DotU OmpA AFG1_ATPase
Other DBs
NCBI-ProteinID: WCP72887
LinkDB
Position
1013793..1015157
AA seq 454 aa
MTEDGDEGDKTVFRPSPLQGLRQNAASGAGYGAPPPLSRTGHAPGSAPLAPSRLADDDVP
LPATPPKVRNIMLAEAEPVLALLAAVRAGRVRMPMPEFHRECAKAIATFERAIAPHYPEE
KRQRAKYAVCATADDIAQNLPGIGTDGAEWARRSMVVQFFHENIGGDRFWQLVDDMLRTP
NDNLDLIELFHACLAAGFEGRFRVMPDGRRRLQEIMTRLYGALPHVRALSQVELVPNWRG
EKAPPARIGMNILALAAAGALALLVLAYAVLRLMLASSGDLPTDRLAALNPDSRLTLSRP
AEAMAAARSEQASRLAKFLEPEIREGLVTVEEDAQTVRVRTTVGQLFESGSDELEAGRET
LFHRIGRAIEGERGSVLIEGHADNDRVATVRFPDNMALSEARAETVGRLIRDDLSDPSRV
TTKGLGESVPIASNDTPEGKSQNRRVEIIVPRRS
NT seq 1365 nt   +upstreamnt  +downstreamnt
gtgaccgaagacggcgacgagggcgacaagacggtcttccgaccgtcgccattgcagggg
ctgcgacagaatgcggcgtcgggcgcgggctatggcgcgccgccgcctttgtcgcggacc
ggccatgcaccgggcagcgccccgctcgcgccatcgcggctggccgatgacgacgtgccg
ctgcccgcgacaccgccaaaggtccgcaacatcatgctggccgaggccgagccggtactc
gcgctgctggcggcggtgcgcgccgggcgggtgcggatgccgatgcccgaattccaccgc
gaatgcgccaaggcgattgcgacgttcgagcgcgctatcgcgccgcactatccggaggaa
aagcgccagcgcgccaagtatgcggtctgcgccaccgccgacgacatcgcgcagaacctg
cccggcatcggcaccgatggcgccgaatgggcgcggcggtcgatggtcgtgcaattcttc
catgagaatatcggcggcgaccggttctggcagctggtcgacgacatgctgcgcacgccg
aacgacaatctcgacctgatcgagctgttccatgcgtgccttgcggccgggttcgaggga
cggttccgcgtcatgcccgacgggcggcggcggttgcaggagatcatgacgcggctgtac
ggcgcgctgccgcatgtccgcgcgctgtcgcaggtcgaactggtcccgaactggcgcggg
gaaaaggccccgcccgcgcggatcgggatgaatatcctggcactggcggcggcgggcgcg
ctggcgctgctggtgctggcctatgccgtgttgcggctgatgctggcgtcgagcggcgac
ttgccgaccgatcggctggccgcgctcaaccccgacagccgactgaccctgtcgcgtccg
gccgaggcgatggcggcggcgcgcagcgaacaggcatcgcgcctcgccaaattcctcgaa
cccgaaatccgcgaagggctggtgacggtcgaggaggatgcgcagacggtgcgggtgcgc
accaccgtcgggcagctgttcgaatccggatcggacgaactggaggccggccgcgagacg
ctgttccatcgcatcggtcgcgcgatcgagggagagcgggggtcggtgctgatcgagggc
catgctgataacgaccgcgtcgcgacggtccgcttccccgacaatatggcgctgtcggag
gcgcgggcggagacggtagggcggctgatccgcgacgacctgtccgatccgtcgcgcgtg
acgaccaaggggctgggggaaagcgtgccgatcgcgtccaacgatacgccggagggcaag
tcgcagaaccgccgggtcgagatcatcgtgccgaggcgttcatga

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