Sphingomonas hankookensis: PPZ50_05360
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Entry
PPZ50_05360 CDS
T08811
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
shan
Sphingomonas hankookensis
Pathway
shan02020
Two-component system
shan02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPZ50_05360
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PPZ50_05360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shan02022
]
PPZ50_05360
02035 Bacterial motility proteins [BR:
shan02035
]
PPZ50_05360
Two-component system [BR:
shan02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
PPZ50_05360
Bacterial motility proteins [BR:
shan02035
]
Flagellar system
Flagellar assembly proteins
Others
PPZ50_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_30
AAA_5
HTH_28
AAA_16
AAA
Sigma70_r4_2
HTH_23
AAA_2
AAA_3
AAA_7
T2SSE
HTH_24
HTH_Tnp_1
MerR
COMP
TIP49
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
WCP73588
LinkDB
All DBs
Position
complement(1111365..1112648)
Genome browser
AA seq
427 aa
AA seq
DB search
MRSIYPSAAVLGAKFTLVSSLRAQGFALANAGQKPGPNDVFLVMEGEVPPIAARTLVLAD
GPAAATPFADGRPARLSYSHADTELAHAFAAALLCGRHEAVAADPESLALQALARRVAGA
DITVLVNGPTGTGKEVLARTIHAESARADGPFVAINCAALPETMLEAMLFGHVKGAFTGA
GAAGEGFFRAAHGGTLLLDEIAEMPLPLQAKLLRVLQEREVVPIGATQAEAVDVRVVACA
NRDLQDEVAAGRFRADLYYRLSVFPLTTRALADRPGDIAALAAAMVVRHAGMRSTLPWIS
DEALAMLGRHDWPGNARELENVIQRALLLGMGDRIEAHDIVFDRASTSAAAAAPRAVEPV
AATLTNIVQIHEFAAIRRTLEECGGNRIETARRLGISERTLRYRLAKAREAGELLAASAT
QSMAASA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgatctatccatccgctgccgtgcttggcgccaagttcacgctggtttcgtcg
ctgcgtgcgcagggcttcgccctggccaatgccggacagaagccggggccgaacgacgtg
ttcctggtcatggaaggcgaagtgccgccgatcgcggcgcgcacgctggtgctggccgat
ggtcccgccgccgcgacgccgtttgcggacggccgcccggcccgcctgtcctattcgcat
gccgataccgaactggcccatgcctttgccgcagccctgctgtgcggccggcacgaggcg
gtcgccgccgatccggaaagcctggcccttcaggcgctggcccgccgcgtcgccggcgcc
gacatcaccgtgctggtcaacggcccgaccggcaccggcaaggaagtgctggcccgcacc
atccacgccgaaagcgcccgcgccgacggcccgttcgtcgcgatcaactgcgcggcgctg
cccgaaaccatgctcgaagcgatgctgttcggccatgtgaagggcgcgttcaccggcgcg
ggtgcggcgggcgaaggctttttccgcgcggcccatggcggcacgctgctgctcgacgag
atcgcggaaatgccgctgccgctgcaggcgaagctgctgcgcgtgttgcaggaacgcgaa
gtcgtgccgatcggcgcgacccaggccgaggcggtcgatgtccgcgtcgtcgcctgcgcc
aatcgcgacctgcaggacgaagtcgccgccggccgcttccgcgccgatctttactaccgc
ctcagcgtcttcccgctgaccacccgcgcgctggccgaccggccgggcgacatcgctgcg
ctcgctgccgcgatggtggtgcgccatgcgggcatgcgttcgacgctgccgtggatttcg
gacgaggcgctggcgatgctcggccgccacgactggccgggcaatgcccgcgagctggaa
aatgtgatccagcgcgcgctgctgctgggcatgggcgaccggatcgaggcgcacgatatc
gtgttcgatcgcgccagcacctccgccgccgccgctgccccgcgcgcggtcgagccggtg
gcggcgacgctgaccaacatcgtccagatccacgagttcgcggcgatccgccgcacgctg
gaggaatgcggcggcaaccggatcgagaccgcccgccggctgggcatttcggagcgtacg
ctgcgctaccgcctcgccaaggcgcgtgaggccggcgagctgctggccgcttcggcgacc
cagtcgatggcggcgtcggcatga
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