Sphingomonas hankookensis: PPZ50_07040
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Entry
PPZ50_07040 CDS
T08811
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
shan
Sphingomonas hankookensis
Pathway
shan03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PPZ50_07040 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
shan03011
]
PPZ50_07040 (rpsA)
Ribosome [BR:
shan03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PPZ50_07040 (rpsA)
Bacteria
PPZ50_07040 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
CsrA
Motif
Other DBs
NCBI-ProteinID:
WCP73605
LinkDB
All DBs
Position
1517366..1519069
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AA seq
567 aa
AA seq
DB search
MASMANPTRDDFASMLDDMFGASESFEGRVVIGTVTGIENDLAVIDVGLKSEGRVPLREF
AAPGQKADLKVGDEVEVYVDRVENANGEAMLSRDRARREAAWDKLETEFAKTARVEGVIF
GRVKGGFTVDLSGAVAFLPGSQVDIRPVRDVTPLMDIPQPFQILKMDRKRGNIVVSRRAV
LEETRAEQRSGLIQSLAEGQVIDGVVKNITDYGAFVDLGGIDGLLHVTDLSYKRVGHPSE
VLNIGDTVRVQIIRINRDTQRISLGMKQLESDPWDGAGAKYPVGAKLSGRVTNITEYGAF
VELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVIVLEVDQDKRRISLGLKQAQANP
WEKFAEDHPVGSTVEGEVKNATEFGLFIGLDGDVDGMVHMSDIAWGISGEDALNLHRKGE
TVQAVVLAVEPDKERISLGMKQLERGGPVAAQAGDRLNKNAIVTVTVLEVRDAGLEVQQG
DDGATGFIKRTDLGRDRDEQRPERFQVGQKFDAMVTGFDRSKKPTFSIKAMQIAEEKQAV
AQYGSSDSGASLGDILGEALKARGEQK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggccagcatggcaaatcccacccgtgacgatttcgcgtcgatgctcgacgacatgttc
ggtgcttcggaaagcttcgaaggccgcgttgtcatcggcaccgtcacgggcatcgaaaac
gacctcgccgtcatcgacgtcggcctgaagtcggaaggccgcgtgccgctgcgcgaattc
gcggcgccgggccagaaggccgatctgaaggtcggtgacgaagtcgaagtctatgtcgac
cgcgtcgagaatgcgaacggcgaagcgatgctgagccgcgaccgcgcccgtcgcgaagcc
gcgtgggacaagctggaaactgaattcgccaagaccgcgcgcgtcgaaggcgtcatcttc
ggtcgcgtcaagggcggcttcaccgtcgacctgtcgggcgccgtggcgttcctgccgggt
tctcaggtcgatatccgtccggttcgcgacgtcaccccgctgatggacatcccgcagccg
ttccagatcctgaagatggaccgcaagcgcggcaacatcgtcgtgtcgcgtcgcgcggtg
ctggaagaaacccgcgccgagcagcgttcgggcctgatccagagccttgccgaaggtcag
gtgatcgacggcgtggtcaagaacatcaccgattacggtgcgttcgtggacctgggcggc
atcgacggcctgctgcacgttaccgacctgtcgtacaagcgcgtcgggcatccgtcggaa
gtgctgaacatcggcgacaccgtccgcgttcagatcatccgcatcaaccgcgacacgcag
cgcatctcgctcggcatgaagcagctggaaagcgatccgtgggatggcgccggtgccaag
tatccggtcggggcgaagctgtcgggccgcgtcacgaacatcaccgaatatggtgcgttc
gtcgaactggagccgggtatcgaaggtctggtccacgtttcggaaatgagctggaccaag
aagaacgtccatccgggcaagatcgtcagcacttcgcaggaagtcgacgtgatcgtcctc
gaggtcgatcaggacaagcgccgcatctcgctgggcctcaagcaggcacaggcgaatccg
tgggagaagttcgcggaagatcaccccgtcggttcgaccgtcgagggcgaagtcaagaac
gcgaccgaattcggcctgttcattggcctggacggcgacgtcgacggcatggtccacatg
tcggacatcgcctggggcatttcgggcgaagacgcgctcaatctgcaccgcaagggcgag
acggttcaggccgtcgtgctggcggtcgagccggacaaggagcgcatctcgctcggcatg
aagcagctggagcgtggtggcccggtcgcggcgcaggcgggtgatcgcctgaacaagaac
gcgatcgtgaccgtgaccgtgctcgaagtccgcgatgcgggcctcgaagtgcagcagggc
gacgatggcgcgaccggcttcatcaagcgcaccgatctcggccgcgaccgcgacgaacag
cgtccggagcggttccaggttggccagaagttcgacgcgatggtcaccggcttcgatcgt
tcgaagaagccgaccttctcgatcaaggcgatgcagatcgccgaagagaagcaggcggtt
gcgcagtacggttcgtccgactcgggcgcgtcgctgggcgacattctgggcgaggcgctg
aaggcgcgcggcgaacagaagtaa
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