Sphingomonas hankookensis: PPZ50_07045
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Entry
PPZ50_07045 CDS
T08811
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
shan
Sphingomonas hankookensis
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shan03032
]
PPZ50_07045
03036 Chromosome and associated proteins [BR:
shan03036
]
PPZ50_07045
03400 DNA repair and recombination proteins [BR:
shan03400
]
PPZ50_07045
DNA replication proteins [BR:
shan03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PPZ50_07045
Chromosome and associated proteins [BR:
shan03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PPZ50_07045
DNA repair and recombination proteins [BR:
shan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PPZ50_07045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WCP73289
LinkDB
All DBs
Position
1519242..1519520
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELVQQLAQENPELPVRDVERIVATFFDAITEQLREGGRVELRGFGAFSTRARDART
GRNPRTGEAVEVDAKRVPYFKPGKEMRARLNV
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccgatcggaactggttcagcaactggcccaggaaaatcccgaattgccggtgcgg
gatgtcgaacggatcgtcgcgacctttttcgatgcgatcaccgaacagctgcgtgaaggc
ggtcgtgtcgaactgcgcggcttcggcgccttttcaacccgcgcgcgcgatgcccgtacc
ggccgcaacccgcgcaccggcgaagcggtcgaggtcgatgccaagcgcgtgccctatttc
aagcccggcaaggaaatgcgcgcgcggctgaacgtctga
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integrated database retrieval system
