Sphingomonas hankookensis: PPZ50_07635
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Entry
PPZ50_07635 CDS
T08811
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shan
Sphingomonas hankookensis
Pathway
shan03420
Nucleotide excision repair
shan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PPZ50_07635
03430 Mismatch repair
PPZ50_07635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shan03400
]
PPZ50_07635
Enzymes [BR:
shan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PPZ50_07635
DNA repair and recombination proteins [BR:
shan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PPZ50_07635
MMR (mismatch excision repair)
Other MMR factors
PPZ50_07635
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
AAA_12
Tudor_1_RapA
Motif
Other DBs
NCBI-ProteinID:
WCP73404
LinkDB
All DBs
Position
complement(1624847..1627135)
Genome browser
AA seq
762 aa
AA seq
DB search
MSSLAPPAPTPADAPYLRGLNEPQRDAVLTTDGPVLVLAGAGTGKTAALTARLAHLLYTR
KAYPSEILSVTFTNKAAREMRERVARLVGDMVEGMPWLGTFHAIGAKMLRRHAELVGLQS
NFTILDTDDQLRLLKQLIVAANLDEKRWPARSLAGLIDGWKNKGMTPADVDAGESERFAN
GRGGELYQEYQDRLKAVNACDFGDLLLHVLTILRTNREVLQQYQQRFRYIMVDEYQDTNS
VQYLWLRLLAQERRNLCCVGDDDQSIYSWRGAQVENILRFERDFPGAKIVRLEQNYRSTP
HILGAASGVIAHNGGRLGKTLWTETDVGEKVRVIGVWDGPEEARRVGEMIERGQRDGRNL
DQFAILVRAQHQTREFEERFIGIGMPYRIVGGFRFYERAEIRDALAYLRVVNQPADDLAF
ERIVNVPKRGLGDKAVQTIHRFARATGSSLMTAAARILDTDELTGAARKSLGRLVGDFAR
WRDMAQGLPHAELARQLLDESGYTAMYQAEKTAEAAGRLENLTELVRAMEEYESLGAFLE
HVSLVMDNEASAEEPKVTIMTIHAAKGLEFDTVFCVGWEEGLFPSQRSLDEGGTASLEEE
RRLAYVAITRARRLAVIFHAANRRIYGQWNSSLPSRFVGELPPEHIETETTMSGGESLWR
ANWSERADPFADVARGTGRGPGWQRAASQGSTFTTTPSRVVEARASAISLGNKGRSDLST
GQRVFHQKFGYGTIETIEGNKLEVLFETAGQKRVLDSFVTPG
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgcttgctccccccgccccgaccccggccgacgccccctatctgcgcggcctg
aacgaaccgcagcgcgatgcggtactgaccaccgacgggccggtgctggtgctggccggc
gcgggcacgggcaagaccgcggcgctgaccgcccggctggcgcatctgctctacacccgg
aaggcctatccgtccgaaatcctgtcggtgaccttcaccaacaaggccgcgcgcgaaatg
cgtgagcgcgtcgcccggctggtcggcgacatggtggaggggatgccgtggctcggcacc
ttccacgcgatcggcgcgaagatgctccggcgccatgccgaactggtcgggttgcagtcg
aacttcaccatcctcgacaccgacgaccagttgcggctgctgaaacagttgatcgtcgcc
gccaatctcgacgagaagcgctggccggcgcgcagcctcgccggcctgatcgacggttgg
aagaacaaggggatgacccccgccgatgtcgatgccggggagagtgaacgcttcgccaat
ggccgcggtggcgagctgtaccaggaatatcaggaccggttgaaggcggtgaacgcctgc
gacttcggcgatctgctgctgcacgtgctgacgatcctgcgcaccaaccgcgaggtgttg
cagcaatatcagcagcgctttcgctacatcatggtcgacgaatatcaggacaccaacagc
gtccagtatctctggctgcgattgctggcgcaggagcggcgcaatttgtgctgcgtcggc
gacgacgaccagtcgatctattcgtggcgcggcgcgcaggtcgagaatatccttcggttc
gaacgcgactttcccggtgccaagatcgtccggctggaacagaattaccgatcgaccccg
catatcctgggcgcggcatcgggcgtgatcgcgcataatggcgggcggctgggcaagacg
ctgtggaccgagaccgatgttggcgaaaaggtccgcgtcatcggtgtatgggacgggccg
gaagaagcgcgccgcgtcggcgagatgatcgagcgcggccagcgtgatggcaggaatctc
gaccagttcgcgatcctcgtccgcgcgcagcaccagacgcgcgagttcgaagaacgcttt
atcggcatcggcatgccctaccggatcgtcggcggcttccgcttctacgaacgcgccgaa
atccgcgatgcgctggcctatctgcgggtcgtcaaccagccggcggacgatttggcgttc
gaacggatcgtcaacgtgcccaagcgcggactgggcgacaaggcggtgcagaccatccac
cgcttcgcgcgggcgaccggcagttcgctgatgaccgccgccgcgcgcatcctcgacacc
gacgaactgaccggcgcggcgcgcaagtcgctggggcggctggtcggcgatttcgcgcgc
tggcgcgacatggcgcagggcctgccgcatgccgaactggcgcggcagttgctcgacgaa
agcggctataccgccatgtaccaggcggaaaagaccgccgaggctgccgggcggctggag
aacctgaccgagctcgtccgcgcgatggaggaatatgaatcgctcggcgcgttcttggaa
cacgtgtcgctggtcatggacaacgaggcatcggcggaggagccgaaggtcacgatcatg
acgatccacgccgccaaggggctggagttcgacacggtgttctgcgtcgggtgggaagaa
gggttgttcccgtcgcaacgctcgctcgacgagggcggcaccgcgtcgttggaggaagaa
cgccgcctcgcctatgtcgcgatcacccgcgcgcggcggctggccgtgatctttcacgct
gccaatcgccgcatctatggacagtggaattcgtccctgccgtcgcgcttcgtcggcgaa
ctgcctcccgagcatatcgaaaccgagacgacgatgtcgggcggcgagagcctgtggcgg
gcgaattggagcgagcgcgccgaccccttcgccgatgtcgcgcgtgggaccgggcggggg
ccggggtggcagcgcgcggcgtcgcaaggctccaccttcaccaccaccccgtcgcgggtg
gtcgaggcgcgggcgagtgcgatcagcctgggcaacaagggccgcagcgacctgtcgacc
gggcaacgcgtgttccatcagaaattcggctatggcacgatcgaaacgatcgaagggaac
aagctggaagtgttgttcgagacggcgggacagaagcgcgtactcgacagcttcgtgaca
ccgggctga
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