Sphingomonas hankookensis: PPZ50_07975
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Entry
PPZ50_07975 CDS
T08811
Name
(GenBank) RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
shan
Sphingomonas hankookensis
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shan03021
]
PPZ50_07975
Transcription machinery [BR:
shan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PPZ50_07975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_28
HTH_23
GerE
HTH_24
HOOK_N
Motif
Other DBs
NCBI-ProteinID:
WCP73466
LinkDB
All DBs
Position
1688777..1689346
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AA seq
189 aa
AA seq
DB search
MRADLAALADGDLASRSAAGDDEAFAEIMRRHRQRVYRLILANVADADEALDLVQETFVS
AHGALRRFDPNRPMSAWLARIALNKSRDWARRRAVRRMLGLATPVEEIAELHADDQPLQD
VQASDRAELNRLARAVAQLPSSQREPLVLCAVDGLSQAEASEVLAISEKAVETRIRRARL
TLAQLLGRN
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtgagggccgatctggcggcactcgccgatggcgacctcgcaagccgttcggctgccggg
gacgacgaggcgttcgccgagatcatgcgaaggcaccgccagcgggtctaccgccttatc
ctcgccaacgtcgccgacgcggacgaggcgctggacctcgtgcaggagacgttcgtatcg
gcccacggcgcgctccgccggttcgatccgaaccggcccatgtcggcgtggctcgcgcgc
atcgcgctcaacaagtcgcgcgactgggcccgccggcgcgcggtcaggcgtatgctcggc
ctggccacgcccgtcgaggagatcgccgagctgcatgccgacgaccagcccctgcaggac
gtgcaggcgtccgaccgagccgagctcaaccggctggcccgagccgtggcgcagctgccg
tcgtcacagcgagagccgctcgtgctctgcgcggtcgatgggctcagccaggccgaggcg
agcgaggtgctcgcgatcagcgagaaggccgtcgagacgcgcatccggcgggcccggctg
accctggcgcagctgctcggccggaactga
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