Sphingomonas hankookensis: PPZ50_08995
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Entry
PPZ50_08995 CDS
T08811
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
shan
Sphingomonas hankookensis
Pathway
shan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PPZ50_08995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shan03400
]
PPZ50_08995
Enzymes [BR:
shan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PPZ50_08995
DNA repair and recombination proteins [BR:
shan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PPZ50_08995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TraB_PrgY_gumN
CCDC93_CC
SAM_KSR1_N
Motif
Other DBs
NCBI-ProteinID:
WCP70532
LinkDB
All DBs
Position
complement(1893822..1894064)
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AA seq
80 aa
AA seq
DB search
MSDERDVSTLSFEDALRELETIVSRLETGQEDLQTAIDLYARGDLLRAQCAARLDAAQAR
IEAIRVDAEGRASTQPFDAQ
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaacgcgatgtttccaccctgtccttcgaagacgcgctgcgcgagctcgaa
accatcgtcagccggttggaaacggggcaagaagatttgcagactgcgatcgacctctat
gcccgtggtgacctgctgcgcgcacaatgcgccgcgcggctcgatgcggcgcaggcgcgg
atcgaggcgatccgggtcgatgccgaagggcgtgcctccacccagccgttcgacgcgcaa
taa
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