Sphingomonas hankookensis: PPZ50_09095
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Entry
PPZ50_09095 CDS
T08811
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
shan
Sphingomonas hankookensis
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shan03016
]
PPZ50_09095 (truA)
Enzymes [BR:
shan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PPZ50_09095 (truA)
Transfer RNA biogenesis [BR:
shan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PPZ50_09095 (truA)
Prokaryotic type
PPZ50_09095 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
WCP70551
LinkDB
All DBs
Position
complement(1913340..1914083)
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AA seq
247 aa
AA seq
DB search
MTRFALTVEYDGRPFVGWQRQSEGASVQGSIERALFEVTGEQAAVHAAGRTDAGVHATGM
RAHVDVAKAIDPFRLMEALNARLRPDPVAILDCEVVPDDWHARFSCMRRAYVYRITCRRA
PLTHELGLAWRVPQPLDAEAMAEGAARLVGRHDFTTFRSAHCQADSPLRTLDRLAVERDG
DRMRIHAAARSFLHHQVRSMVGCLAMVGQGKRTPDDLADILAARDRSALWLNAPPDGLYF
VGAEYPG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttcgccctgacggtcgaatatgacggacggccgttcgtcggctggcagcgc
cagtccgaaggggcgagcgtgcaaggatcgatcgagcgcgcgctgttcgaggtgaccggc
gagcaggcggcggtccatgccgccgggcgtaccgatgccggggtccatgcgacggggatg
cgggcgcatgtcgacgttgcgaaggcgatcgacccgttccggttgatggaggcgctgaac
gcccggctgcggccagatccggtcgcgatcctcgactgcgaagtcgtgcccgacgactgg
catgcacgcttttcctgcatgcggcgagcctatgtctatcgcatcacgtgccgtcgcgcg
ccgctgacccatgagctggggctggcatggcgggtgccgcagccgctggatgccgaggcg
atggcggaaggcgcggcacggttggtcgggcggcacgacttcaccacctttcgctcggca
cattgccaggcggacagtccgctgcggacgctcgaccggttggcggtggagcgcgatggc
gaccggatgcgcatccatgccgccgcgcggtcattcctgcatcatcaggtccgctcgatg
gtcggctgccttgccatggtgggtcaaggcaagcggacgccggacgatctggccgatatc
ctcgcggcgcgcgaccggtcggcgctgtggctgaacgcgccgccggacgggctgtatttc
gtgggggctgagtaccccggctga
DBGET
integrated database retrieval system
