Sphingomonas hankookensis: PPZ50_09165
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Entry
PPZ50_09165 CDS
T08811
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
shan
Sphingomonas hankookensis
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shan03400
]
PPZ50_09165
Enzymes [BR:
shan01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PPZ50_09165
DNA repair and recombination proteins [BR:
shan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PPZ50_09165
Prokaryotic type
PPZ50_09165
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WCP70565
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All DBs
Position
1925873..1927237
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AA seq
454 aa
AA seq
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MSDPVLLWLRQDLRLRDQPALLAAIDDGAVIPVYILDDTSPGDWAIGGAQRWWLHHSLVA
FDDSLRAKDSRLILRRGEAVAELRKLMKGTGATRIHAVRHYEPWWVKAQEALGDTLSLHD
GNHLRPPESVRTGSGGMFKIYSSFWKALNQMLPPEDPVPMPRTIPSPSQWPKSDKLADWK
LLPTKPDWATAFGTSWQPGEDGAHKALKSFAARLDDYDTARNLPSVDGSSNLSPHLHHGE
LSPRQIWAALDGQGDSLTTYRKELAWRDFASGVILSMPDYADANGRPRYDKLKWRSDAAA
KRDLKAWQQGRTGYPIVDAGMRQLWQIGWMHNRVRMIAASFLIKHLLIDWREGERWYWDC
LVDADLGNNAVNWQWVAGTGVDSNMFGRIMAPLTQSEKFDAADYIRRWVPELAKLPDEAI
HDPDAAGCRPKAYPEKIIEHREARERALAAARGI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcccgtcctactctggctccgccaggacctccgcctgcgcgaccagcccgcg
cttctcgccgcgatcgacgatggggcggtgatcccggtctatatcctcgacgacacctcg
cctggcgactgggcgatcggcggcgcgcagcgctggtggctgcatcacagcctcgtcgcg
ttcgacgactcgctgcgggcaaaggactcgcgcctgatcctgcgccggggcgaagcggtc
gccgaactgcgcaagctgatgaagggaaccggcgcgacccgcatccatgccgtgcgccat
tacgaaccctggtgggtaaaggcgcaggaggcactcggcgatacgctctccctgcacgat
ggcaatcacctacgcccgcccgaaagtgtccgcaccggatcgggagggatgttcaaaatc
tattcgtccttttggaaggcgctgaaccagatgctgccgcccgaggacccggtgccgatg
ccgcgcacgattccgtcgccgtcccaatggccgaaatccgacaagctcgccgactggaag
ctgctcccgaccaagcccgactgggcgaccgcgttcggcacatcgtggcaaccgggcgag
gatggcgcgcacaaggcgctgaaatccttcgccgcccgcctcgacgattacgacaccgcc
cgcaacctgccctcggtcgacggcagttcgaacctgtcgccgcatctccaccatggcgaa
ctctccccgcggcaaatctgggcggcgctggacgggcagggcgacagcctgacgacctat
cgcaaggaactggcatggcgcgatttcgccagcggcgtcatcctgtcgatgcccgactat
gccgacgccaatggccgcccgcgctacgacaaattgaaatggcggagcgacgcggcggcg
aagcgcgatctgaaggcgtggcagcagggccgcaccggctatccgatcgtcgatgccggc
atgcgccagctgtggcagatcggctggatgcacaatcgcgtgcggatgatcgccgcatcg
ttcctcatcaagcatctgctgatcgactggcgcgagggcgaacgctggtattgggactgc
ctggtcgacgccgatctcggcaacaatgcggtcaactggcaatgggtcgccggcaccggc
gtcgattcgaacatgttcgggcggatcatggccccactcacccagtcggaaaaattcgac
gccgccgactatatccgccgctgggtgcccgaactggcgaaactgccggacgaggcgatc
cacgatcccgatgcggcggggtgtcggccgaaggcgtatccggaaaagatcatcgagcac
cgggaggcgcgcgaaagggcgctggcggcggcgcgggggatttga
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