Sphingomonas hankookensis: PPZ50_10370
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Entry
PPZ50_10370 CDS
T08811
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
shan
Sphingomonas hankookensis
Pathway
shan00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PPZ50_10370 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shan01007
]
PPZ50_10370 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shan03016
]
PPZ50_10370 (cysS)
Enzymes [BR:
shan01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
PPZ50_10370 (cysS)
Amino acid related enzymes [BR:
shan01007
]
Aminoacyl-tRNA synthetase
Class I (G)
PPZ50_10370 (cysS)
Transfer RNA biogenesis [BR:
shan03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PPZ50_10370 (cysS)
Prokaryotic type
PPZ50_10370 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
CysS_C
tRNA-synt_1f
DALR_2
tRNA-synt_1d
SSF
Motif
Other DBs
NCBI-ProteinID:
WCP70788
LinkDB
All DBs
Position
complement(2183885..2185324)
Genome browser
AA seq
479 aa
AA seq
DB search
MHGAPLTLHNSLTRSTQRFEPLDPAKGVRVYSCGPTVYNYAHIGNLRAYVFTDTLSRVLR
WKGYPLTHVINITDVGHLTSDSDAGDDKMEAAAKARAQSIWDIAAHYTQAFKRNLRDLNI
DDPTRWSVATDHIAEMIAFAERIAPEHCYEIDSGLYFDSTTVPHYGALAGGQDDAGEGRI
DPVAGKRHPQDFAIWRKTPASESRQMEWNSPWGKGAPGWHLECSVMSIRYLGAPFDIHTG
GIDHREIHHPNEIAQNQAYCGCADSGAAFWMHNNFLVERSGKMSKSKGDFTTLQTLIDGG
VHPLAYRLMCLSAQYRSELEFSPDNLLAALTRLKRLVMTVAALRSRASGDGDAAKAAAYR
ERLDAAVSDDLNTPRALPVLDELLADKKLTPADRLAALADFDAVLGLSLATLDRADLRVR
PADATIDAATIESRLADRKEARAAKDFAASDAIRDELMAAGVEVMDGDPLGWDWRPTLT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtgccccgctcacgctccacaattcgctgacgcgcagtacgcagcgtttcgaa
ccgctcgacccggcaaagggcgtccgcgtctattcgtgcggcccgacggtctacaactat
gcccatatcggcaatctgcgcgcctatgtgttcaccgacacgctcagccgcgtgctgcga
tggaagggctatccgctcacccatgtcatcaacatcaccgatgtcggccatctgacgtcc
gactccgatgccggcgatgacaagatggaagcggcggccaaggcccgcgcccagtcgatc
tgggacatcgccgcccattatacgcaggcattcaagcgcaatctgcgcgacctcaacatc
gacgatcccacccgctggtcggtcgcgaccgaccatatcgcggagatgatcgccttcgcc
gaacggatcgcgccggagcattgctacgagatcgacagcgggctctatttcgacagcacc
accgttccccattacggcgcactcgccggcgggcaggacgatgccggcgaaggccgcatc
gatcccgtcgccggcaagcgccatccacaggatttcgcgatctggcgcaagactccggcg
agcgagagccgccagatggaatggaattcgccgtgggggaagggtgcgcccggctggcac
ctcgaatgctcggtcatgagcatcagatatctcggcgcgccgttcgacatccacaccggc
ggcatcgaccaccgcgagatccaccatccgaacgagatcgcccagaaccaggcctattgc
ggctgcgccgacagtggtgcggcgttctggatgcacaacaacttcctcgtcgaacgatcg
ggcaagatgtcgaagtcgaagggcgacttcaccacgctccagacgctgatcgacggcggc
gtgcatccgctcgcctaccggctgatgtgcctgtcggcgcagtatcgctcggaactggaa
ttttcgcctgacaatctgctggcggcgctgacccggctgaagcgactggtgatgaccgtc
gcagcgctgcgcagccgtgcgagcggcgacggcgatgcggccaaggcggcggcctatcgc
gagcggctcgatgcggctgtgtccgacgacctcaacacgccgcgcgccctgccggtgctt
gacgaactgctcgccgacaagaagctgacgcccgccgaccgcctcgccgcgctcgccgac
ttcgacgcggtgctcgggctcagcctcgccaccctcgaccgcgccgacctgcgcgtccgc
ccggccgatgctacgatcgacgctgcgacgatcgagtcgcggctggccgaccgcaaggaa
gcccgtgctgccaaggatttcgccgcgagcgacgcgatccgcgacgaactgatggcggcg
ggggtcgaggtcatggacggcgacccgctcggctgggattggcgcccgacgctgacctag
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