Sphingomonas hankookensis: PPZ50_11385
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Entry
PPZ50_11385 CDS
T08811
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
Organism
shan
Sphingomonas hankookensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
Motif
Other DBs
NCBI-ProteinID:
WCP70972
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All DBs
Position
complement(2436888..2439647)
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AA seq
919 aa
AA seq
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MTASKFSIYGAHGVALLASTMLSGTAASAQTRPAAAAPAVQPPTAQAPAAPVAPTRTIRS
LRVEGAQRIEPDTVLSYTKLRVGIPYTAETLDQAIKDLYASDLLANVEIEGAETSDIIVR
VRENPIINRVVLEGNKRLKDDKITKEIKLAPRQIFTRTAVRADVARIVELYRRQGRFAAN
VEPKMVMLDQNRVDVIFEIQEGPKSKVRQINILGNEVFSDSELRGEMATKESRPWRIFSS
NTSYDQDRLAYDQQKLRQFYLTNGYADFRVISAVAELTPDKEDFIITYVVEEGKRYKFGD
VAVESAIRDFDNASLTKSLPMKKGDWYNAKLTEDAIDQLSEYAGLFGYAFTDVRPEYQPD
RENLTMAITFFLNEANRTYVEKIDITGNTQTQDRVIRREFRVAEGDAFNAFLIKRSQDRI
NSLGYFQDKFEIERKEGSSPDRIILAANVEEKSTGELTLSAGFSSLERFIIQASIRQRNF
RGKGQDLQASVNYSTYQKSIELGFTEPYLFDKNIALGGTLFRRDFNSFNFLGTGRNSLYS
QISTGGQVVASVPLTEFWTLSGRYQLSQDNVGLDEATYFTDGVCDPLKAGRYLCDSIGNR
LSSIVGANLIFDNLNNRLRPSRGQRLVTGVDFAGLGGDVRYARVRGDFDKYWNLGGFVLS
AGIEGGYIHALQKSPGEGIDPVRIVDRFYLGEPQFRGFDIRGVGPRIQRQRYTGSVAGGD
QALITARDQVLNDPLGGKAYYLGKLELEPPLGSGIAELGLRPSIFIQAGALFGVTRPLPT
VQFEQAKNADGTLRFNKDGSPSLLPFSQPTKINGQQVYNNQFTDASGATAFRQTTCAVGY
SATIGGTCAGGEANTLAVSTTDPFLEQFLGDSARPRLSIGIGVNWNSPFGPLRIDLAKAL
LSQPGDDKKLITFNVGTQF
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcaagcaagttttcgatttacggcgcgcatggcgtcgcgctgctcgcgagcacg
atgctctcgggcacggccgcctcggcccagacgcgcccggccgctgctgccccggcagtc
cagccgcccaccgcgcaggcgccggcggcgcccgtcgcgccgacccgtaccatccgctcg
ctccgggtcgaaggcgcacagcgtatcgaaccggacacggtgctgtcctataccaagctg
cgcgtcggcattccgtacaccgcggaaacgctcgatcaggcgatcaaggacctgtacgcg
tcggacctgctcgccaatgtcgagatcgagggcgccgagaccagcgacatcatcgtccgg
gtgcgcgagaacccgatcatcaaccgcgtcgtgctggaaggcaacaagcggctgaaggac
gacaagatcaccaaggagatcaagctcgccccgcggcagatcttcacccgtaccgccgtc
cgtgccgacgtggcgcggatcgtcgagctgtatcgccgtcagggccggttcgcggcgaat
gtcgagccgaagatggtcatgctcgaccagaaccgcgtcgacgtaatcttcgaaatccag
gaagggccgaagtccaaggtccgccagatcaacatcctcggcaacgaggtgttcagcgac
agcgagctgcgcggcgagatggcgaccaaggagtcgcggccgtggcgcatcttcagctcg
aacacgagctatgatcaggatcgcctcgcctacgaccagcagaagctgcgccaattctac
ctgaccaacggctatgccgatttccgcgtcatctcggccgttgccgaactgacgccggac
aaggaagacttcatcatcacctacgtggtggaggaagggaagcggtacaaattcggcgat
gtggcggtcgaaagcgcgatccgcgacttcgacaacgcatcgttgaccaagtcgctgccg
atgaagaagggcgactggtacaacgcgaagctgaccgaagacgcgatcgaccaactgagc
gaatatgccgggctgttcggctatgcgttcaccgacgtgcgcccggaatatcagccggac
cgcgaaaacctgaccatggcgatcacgttcttcctgaacgaagccaaccgcacctatgtc
gagaagatcgacatcaccggcaatacgcagacgcaggaccgcgtgatccgtcgcgaattc
cgcgtggccgaaggggacgcgttcaacgcgttcctgatcaagcgttcgcaggaccgcatc
aattcgctgggatatttccaggacaagttcgaaatcgagcgcaaggaagggtcctcgccc
gaccggatcatcctggcggcgaatgtcgaggaaaagtcgaccggcgaactgacgctgtcg
gccggcttctccagcctcgaacgcttcatcatccaggcgtcgatccgccaacggaatttc
cggggcaaggggcaggaccttcaggcgtcggtcaattattcgacctatcagaagtcgatc
gagctgggcttcaccgaaccctatctgttcgacaagaatatcgcgctgggcggtacgctg
ttccgccgcgatttcaattcgttcaacttcctcggcaccggccgcaactcgctctattcg
cagatttcgaccggcggacaggtcgtggcgagcgtgccgctgaccgagttctggacgctg
tcgggccgctatcagttgagccaggacaatgtcgggctggacgaggcgacctatttcacc
gacggcgtctgcgacccgttgaaggccgggcgctatctgtgcgattcaatcggcaaccgt
ttgtcgagcatcgtcggcgcgaatctgatcttcgacaatctcaacaaccgcctgcgcccg
tcgcgtggccagcggctggtgaccggcgtcgactttgccggtctgggcggcgacgtgcgc
tatgcccgcgtgcgcggcgacttcgacaaatactggaatctcggcgggttcgtcctgtcg
gccggtatcgagggcggctatatccacgcgctccagaagagcccgggcgagggaatcgat
ccggtccgcatcgtcgatcgcttctatctgggtgaaccgcagttccgcggcttcgacatt
cgcggcgtcggcccgcgcatccagcggcagcgttacaccgggtcggtcgccgggggcgat
caggcgctgatcaccgcacgcgatcaggtgctgaacgacccgctgggcggcaaggcctat
tatctcggcaagctcgaactcgagccgccgttgggatcgggcatcgccgagctggggctg
cgtccgtcgatcttcatccaggccggtgcgctgttcggcgtcacccgtccgctgccgacc
gttcagttcgagcaggcgaagaatgccgatggcacgttgcggttcaacaaggacgggtcg
ccgtcgttgctgccgttcagccagccgaccaagatcaacggtcagcaggtctacaacaac
cagttcaccgacgcgtcgggcgcaacggcattccgccagaccacctgtgcggtcggttac
tcggcgacgatcggtggcacgtgcgccggcggtgaagcgaacacgcttgccgtgtcgacc
accgatcccttcctcgaacagttccttggcgattcggctcgcccgcgcctgtcgatcggt
atcggggtgaactggaactcgccgttcgggccgctgcgcatcgaccttgccaaggcgttg
ctgagccagccgggcgacgacaagaaactcattactttcaacgtaggaacccaattctga
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