KEGG   Sphingomonas hankookensis: PPZ50_13330
Entry
PPZ50_13330       CDS       T08811                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
shan  Sphingomonas hankookensis
Pathway
shan00010  Glycolysis / Gluconeogenesis
shan00020  Citrate cycle (TCA cycle)
shan00260  Glycine, serine and threonine metabolism
shan00280  Valine, leucine and isoleucine degradation
shan00310  Lysine degradation
shan00380  Tryptophan metabolism
shan00620  Pyruvate metabolism
shan00630  Glyoxylate and dicarboxylate metabolism
shan00640  Propanoate metabolism
shan00670  One carbon pool by folate
shan00785  Lipoic acid metabolism
shan01100  Metabolic pathways
shan01110  Biosynthesis of secondary metabolites
shan01120  Microbial metabolism in diverse environments
shan01200  Carbon metabolism
shan01210  2-Oxocarboxylic acid metabolism
shan01240  Biosynthesis of cofactors
Module
shan_M00009  Citrate cycle (TCA cycle, Krebs cycle)
shan_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shan_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
shan_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:shan00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PPZ50_13330 (lpdA)
   00020 Citrate cycle (TCA cycle)
    PPZ50_13330 (lpdA)
   00620 Pyruvate metabolism
    PPZ50_13330 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    PPZ50_13330 (lpdA)
   00640 Propanoate metabolism
    PPZ50_13330 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PPZ50_13330 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    PPZ50_13330 (lpdA)
   00310 Lysine degradation
    PPZ50_13330 (lpdA)
   00380 Tryptophan metabolism
    PPZ50_13330 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PPZ50_13330 (lpdA)
   00670 One carbon pool by folate
    PPZ50_13330 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shan04147]
    PPZ50_13330 (lpdA)
Enzymes [BR:shan01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PPZ50_13330 (lpdA)
Exosome [BR:shan04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PPZ50_13330 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 FAD_oxidored HI0933_like FAD_binding_2 GIDA DAO AlaDh_PNT_C FAD_binding_3 2-Hacid_dh_C Thi4 3HCDH_N Lys_Orn_oxgnase
Other DBs
NCBI-ProteinID: WCP71325
LinkDB
Position
complement(2809384..2810796)
AA seq 470 aa
MAESYDLIVLGSGPGGYVAAIRASQLGLKVAIVERERLGGICLNWGCIPTKALLRSAEIY
HYMMHAAQYGLSAEKPSFDLAKVVDRSRKVAGQLNAGVKGLMKKNKVAVHEGVGTITAKG
KLSVKQGDKTTELEARHIIIATGARARDLPFAKADGAKIWTYRHAMVPPEMPTKLLVIGS
GAIGVEFASFYNDMGADVTIVEMLDRIMPVEDAEVSEFMHKGLTKQGMTIKTKSGLEKLE
ATPAGVKAAIKGPDGKVEQVEFSHAIVAIGIVPNTENIGMEALKIEAERGHIKTDGYGKT
NVEGIWAIGDVTGAPWLAHKASHEGVIAAEAIAKALGNKDVHPHAMDKNNIPGCTYARPQ
VASVGFTEAKAKEAGYSVKVGKFPFIGNGKAIALGEAEGFVKTVFDAKTGELLGAHMVGA
EVTEMIQGYVVARQLETTEQELTETVFAHPTISESMHESVLAAYGRALHI
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggctgaatcttacgacctcatcgtgctcggttccggccccggcggctatgtcgcggcg
atccgggcgagccagctgggcctaaaggtcgcgatcgtcgagcgcgagcggctgggcggc
atctgcctcaactggggctgcatcccgaccaaggcgctgctgcgttcggccgaaatctat
cactacatgatgcatgccgcacagtacggcctgtcggcggagaagccgtcgttcgacctt
gcgaaggtcgtcgatcgcagccgcaaggtggcgggccagctgaacgcgggcgtcaagggg
ctgatgaagaagaacaaggtcgcagtgcacgagggcgtcggcacgatcacggccaagggc
aagctgagcgtcaagcagggcgacaagacgaccgagctggaagccaggcacatcatcatc
gcgacgggcgcccgcgcccgcgacctgccgttcgccaaggccgatggcgccaagatctgg
acgtaccgccacgcgatggtgccgccggaaatgccgaccaagctgctggtcatcggatcg
ggcgcgatcggcgtcgagttcgccagcttctacaacgacatgggcgccgacgtgacgatc
gtcgagatgctcgaccggatcatgccggtcgaggatgccgaagtcagcgagttcatgcac
aaggggctgaccaagcagggcatgacgatcaagaccaagtcgggtctggaaaagctagaa
gcgactccggcgggcgtcaaggccgcgatcaaggggccggacggcaaggtcgaacaggtc
gagttcagccatgcgatcgtcgcgatcggcatcgtgcccaataccgagaatatcggcatg
gaagcgctgaagattgaagccgagcgcggccacatcaagaccgacggctatggcaagacc
aatgtcgagggcatctgggcaatcggcgacgtgaccggcgcgccgtggctggcgcacaag
gcgagccatgagggcgtgatcgccgccgaggccatcgccaaggcgctgggcaacaaggac
gtccatccgcacgcgatggacaagaacaacattccgggctgcacctatgcgcgtccgcag
gtcgccagcgtcggcttcaccgaggcgaaggccaaggaagcgggctacagcgtcaaggtc
ggcaagttcccgttcatcggcaacggcaaggcgatcgcgctgggcgaggccgaaggcttc
gtaaagacggtgttcgacgccaagaccggtgagctgctgggcgcgcacatggtcggcgcg
gaagtgaccgagatgatccagggctatgtcgtcgcccgccagctggagacgaccgagcag
gagctgaccgaaacggtgttcgcgcacccgaccatctccgaatcgatgcatgagtcggtg
ctggcggcgtacggtcgcgcgctgcacatctga

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