Sphingomonas hankookensis: PPZ50_14940
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Entry
PPZ50_14940 CDS
T08811
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
shan
Sphingomonas hankookensis
Pathway
shan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PPZ50_14940 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shan03400
]
PPZ50_14940 (recO)
DNA repair and recombination proteins [BR:
shan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PPZ50_14940 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PPZ50_14940 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
WCP71629
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All DBs
Position
complement(3149122..3149853)
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AA seq
243 aa
AA seq
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MHLNTTAILLSVRPHGEHGAVVRVLTEHAGVQPGYVRGGRSRAIRPVLQPGNLIRGDWRA
RTDTQLAALTVELVESRAPLFAEPLAAAAIDWMCALTAYALPEAQPYPRIHAALDGLFAA
IAAAPGARDWVGALVRTELLILSELGFGLSLDECVATGVTDDLTHVSPKSGGAVSRAAAV
GLEHRLLPLPAFLIEGGRADWAAAFDGLTLSGHFLSRDLLGLKGQDVLAARTRLVERLKR
TVA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcaacaccaccgccatcctcctctccgtgcgcccgcacggcgaacatggtgcg
gtcgtgcgggtgctgaccgaacatgctggcgtccagcccggttacgtccgcggcgggcgc
agccgggcgatccggccggtgctgcaaccgggcaacctgatccgcggcgactggcgcgcg
cggaccgatacgcagctggcggcgctgaccgtcgaactggtcgaaagccgcgcgccgctg
ttcgccgagccgttggccgccgccgcgatcgactggatgtgtgcgctgaccgcttatgcg
ctgcctgaggcgcagccctatccgcgcatccatgccgcgctcgacgggttgttcgcggcc
atcgccgcggcgccgggtgcgcgcgactgggtcggggcgctggtgcggaccgagttgctg
atcctgtccgaactgggcttcggcctgtcgctcgacgaatgcgtcgcgaccggggtgacc
gacgacctgacccatgtcagccccaagagcggcggcgcggtatcgcgggcggcggcggtc
ggcctcgaacaccgcctgctgccgctacccgccttcctgatcgaagggggccgggccgac
tgggcggcggcgttcgacgggctgacgctgtcgggccatttcctgtcgcgcgatttgctg
gggctgaaggggcaggacgtgctggcggcgcgcacccggctggtcgagcggctgaaaagg
acggttgcgtga
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integrated database retrieval system
