Sphingomonas hankookensis: PPZ50_15550
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Entry
PPZ50_15550 CDS
T08811
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
shan
Sphingomonas hankookensis
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
shan03110
]
PPZ50_15550 (clpB)
Chaperones and folding catalysts [BR:
shan03110
]
Heat shock proteins
HSP100
PPZ50_15550 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
nSTAND3
AAA_16
IstB_IS21
Sigma54_activat
AAA_7
Mg_chelatase
AAA_25
NACHT
bpMoxR
AAA_24
TniB
T2SSE
AAA_14
NBD_SMAX1
DUF1843
Motif
Other DBs
NCBI-ProteinID:
WCP71742
LinkDB
All DBs
Position
3268720..3271296
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AA seq
858 aa
AA seq
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MNLEKFTDRAKGFLQAAQTVAIRNSHQRISPEHILKALLDDEQGMASGLINAAGGDARRA
NAETDAALAKVPSVSGSGAQSSPGLDNDTVRLLDQAEQIATKAGDSFVTVERLLLALALS
PGAAGKALTTAGVTPQGLNAAIDKLRGGRSADTAGAEDRYDALKKFARDLTAAARDGKLD
PVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIAEGLALRIANGDVPDGLKDRALM
SLDMGSLIAGAKYRGEFEERLKGVLDEVKGADGQIILFIDEMHTLIGAGKSEGAMDAGNL
LKPALARGELHCIGATTLDEYRKHVEKDPALQRRFQPVFVGEPTVEDTISILRGLKEKYE
LHHGVRITDGALVSAATLSNRYITDRFLPDKAIDLMDEAASRIRMEVESKPEEIESLDRR
ILRMKIEREALRRESDAASIDRLDTLEEELANAEEQLAGLTTRWQAERDKIASEAKLKEQ
LDAARVALEQAQRSGDLAKMSELTYGTIPTLEKQLAEAQQNAGGAMLREEVTADDIAAVV
SRWTGIPVDRMLEGEREKLLTMEAALGKRVIGQAEAVRAVATAVRRSRAGLQDPNRPLGS
FLFLGPTGVGKTELTKSLAEFLFDDPNAMVRIDMSEFMEKHAVARLIGAPPGYVGYEEGG
VLTEAVRRRPYQVVLFDEVEKAHGDVFNILLQVLDDGRLTDGQGRTVDFSNTIVILTSNL
GSQYLTNLADGQPVEEVEPQVMDVVRAHFRPEFLNRLDEIILFHRLAADHMAPIVDIQVG
RVGKLLADRKVKIELTDAARAWLGRVGYDPVYGARPLKRAVQRYLQDPLADLILRGEVRD
GSTVRVDEGDGALSLSVA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagagaaattcaccgatcgcgcgaaaggctttttgcaggccgcgcagacggtc
gcgatccgcaacagccatcagcggatcagcccggaacatatcctcaaggcgctgctcgac
gacgagcagggcatggcgtcgggcctcatcaacgccgccggcggcgacgcgcggcgcgcg
aatgcggagaccgatgccgcgctggccaaggtgccgtcggtgtcgggttcgggggcgcag
tcctcgccggggctggacaacgacacggtgcgcctgctcgaccaggccgagcagatcgcg
accaaagcgggcgacagcttcgtcaccgtcgagcggctgttgctggcgcttgcgctgtcg
cccggcgcggcgggcaaggcgctgaccaccgctggcgtcaccccgcaggggctgaacgcc
gcgatcgacaaattgcgcggcgggcgcagcgccgacacggcgggggccgaggatcgctat
gacgcgctcaagaaattcgcccgcgacctgacggcggcggcgcgcgacggcaagctcgat
ccggtcatcggccgcgacgaggaaatccgccgcacgatccagattcttgcccgccggacc
aagaacaatccggtgctgatcggcgagccgggcgtcggcaagaccgccatcgcggaaggc
ctcgcgctgcgtatcgccaatggcgacgtgcccgatggcctcaaggaccgcgcgctgatg
tcgctcgacatggggtcgctgatcgccggcgcgaaatatcgtggcgagttcgaggaacgg
ctgaagggcgtgctcgacgaggtgaagggcgccgatgggcagatcatcctgttcatcgac
gagatgcacacgctgatcggtgcgggcaagtccgaaggggcgatggatgcgggcaacctg
ttgaaaccggcgcttgcccgcggtgaactccactgcatcggtgcgaccacgctcgacgaa
tatcgcaagcatgtcgaaaaggaccccgcgctccagcggcggttccagccggtgttcgtc
ggcgaaccgaccgtcgaggacacgatcagcatcctgcgcgggctgaaggagaagtacgag
ctgcaccatggcgtgcggatcaccgacggcgcgctggtgtcggcagcgacgctcagcaac
cgctacatcaccgaccgcttcctgcccgacaaggcgatcgacctgatggatgaggccgcc
agccgcatccgcatggaggtggagagcaagcccgaggagatcgaaagcctcgaccgtcgc
atcctgcgcatgaagatcgagcgcgaggcgctgcgccgcgagagcgatgcggcgagcatc
gaccggctcgacacgctggaggaggaactggccaatgccgaggagcagctggcgggcctc
acgacgcggtggcaggcggagcgcgacaagatcgcttccgaagccaagctcaaggaacag
ctcgacgccgcgcgtgtcgcgctggaacaggcgcagcggtcgggcgacttggccaagatg
tccgagctgacctatggcaccatcccgacgctggaaaagcaactggccgaggcgcagcaa
aatgccggcggcgcgatgctgcgcgaggaagtgaccgccgacgacattgccgccgtggtc
agccgctggactggcatcccggtcgaccggatgctggagggcgagcgcgagaagctgctg
acgatggaagcggcgctgggcaagcgggtgatcggccaggccgaagcggtgcgcgccgtc
gccaccgccgtccgccgttcgcgtgccggtctacaggacccgaaccggccgctggggtcg
ttcctgttccttgggccgaccggcgtcggcaagaccgagttgaccaagtcgctggccgag
ttcctgttcgacgatcccaacgcgatggtgcggatcgacatgagcgagttcatggaaaag
cacgcggtcgcccggctgatcggtgcgcctccgggctatgtcggttatgaggaaggcggc
gtgctgaccgaagccgtgcggcgtcggccctatcaggtcgtgctgttcgacgaggtggag
aaggcgcatggcgacgtcttcaacatcctgttgcaggtgctggacgatggtcgcctgacc
gatgggcagggtcgcacggtcgatttttcgaacacgatcgtgatcctgacgtcgaacctc
ggctcgcaatacctgaccaacctcgccgacgggcagccggtcgaggaggtcgagccgcag
gtgatggacgtggtccgcgcgcatttccggccggagttcctcaaccggctggacgagatc
atcctgttccaccgcctcgccgccgatcacatggcgccgatcgtcgacatccaggtcggg
cgcgtcggcaaactgctggcggaccgcaaggtgaagatcgaactgaccgacgccgcgcgg
gcgtggctggggcgggtcggctatgacccggtctacggcgcgcgaccgctgaagcgtgcg
gtgcagcgctatctgcaggacccgctggccgacctgatcctgcgcggcgaggtccgcgac
gggtcgacggtgcgggtcgacgagggtgacggggcgctgagcctaagcgtcgcgtaa
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