Sphingomonas hankookensis: PPZ50_15770
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Entry
PPZ50_15770 CDS
T08811
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
shan
Sphingomonas hankookensis
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shan03000
]
PPZ50_15770
Transcription factors [BR:
shan03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PPZ50_15770
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WCP71782
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Position
3326187..3327383
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AA seq
398 aa
AA seq
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MKPFDLNLRHLRAIGHIVAERSLNRAAEVAGLSQPALTQGLSKMERQLGTRLFERQPDGM
AATAAGLALAERTERAFALLAGVGRRSGKRGFARPDALMTATQAEAFLHFADAGGFAGAA
ASSGLSQPAIHRAVRELEQIWATPLAERRGRGMVLTPAGRALARGVRLAAGEIAAGIAEA
RGDAAEGGRIAVGAMPLSRALLLPHALAIFLPDARGTLIDVVEGSWRELIDPLLDGVIDL
MIGALRSDPPPGIDQLPLFTDRLAIFARAGHPLAGQAVDLERLAAQNWVVGPIGTPLRSH
WETLFAGRPLPNVPVECGSVMVIRGLLATSDLLTLLSPDQVALEVDAGLLVRIGPELTDT
VRMIGITTRTGWRPTAGQARLIALLERASQETRLQENR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccgttcgatcttaacctgcgccatctgcgtgccatcggccatatcgtcgccgaa
cgcagcctcaaccgcgccgccgaggtcgccggtctgtcgcagcccgcgctgacgcaaggg
ttgagcaagatggagcggcaactcggcacccggctgttcgaacgccagcccgacggcatg
gccgcaaccgccgccgggctggcgctggccgagcggaccgagcgtgccttcgccctgctg
gcgggggtcggacggcgcagcggcaagcgcggcttcgcccggcccgacgcgctgatgacc
gcgacccaggccgaggcgttcctgcacttcgccgatgccggcggctttgccggggcggcg
gcgagcagcggcctgtcgcaaccggcgatccaccgcgcggtacgcgaactggaacagatc
tgggcgacgccgctggccgaacggcgcgggcgcggcatggtgctgacccccgccggtcgc
gcgctggcgcgcggcgtgcgactggcggcgggggagatcgccgccggtatcgccgaggca
cgcggcgatgcggcggaaggtggccggatcgccgtcggcgcgatgccgctcagccgcgcg
cttttgctgccccatgcgctcgccattttcctgcccgatgcccgcgggacgctcatcgac
gtggtggaagggtcgtggcgcgagttgatcgacccgctgctcgacggggtgatcgacctg
atgatcggcgcgctgcgcagcgacccgccgcccgggatcgatcaattgcccttgttcacc
gaccggctcgccatcttcgcccgcgccggccatccgcttgccgggcaggcggtcgatctg
gaacggctggccgcgcagaactgggtcgtcgggccgatcggcacaccgctgcgcagccat
tgggagacgctgttcgccggccgcccgcttcccaacgtaccggtcgaatgcgggtcggtg
atggtgatccgcgggctgctggcgaccagcgatctcctgacgctgttgtcgcccgatcag
gtcgcgctggaggtggatgccgggctgctggtacggatcggtcccgagctgaccgatacg
gtgcggatgatcggcatcaccacccgcaccggctggcgcccgaccgcagggcaggcgcgg
ttgatcgctctactggaacgcgcatcgcaggaaaccagacttcaggaaaaccgatag
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