KEGG   Sphingomonas hankookensis: PPZ50_17125
Entry
PPZ50_17125       CDS       T08811                                 
Symbol
traC
Name
(GenBank) type IV secretion system protein TraC
  KO
K12063  conjugal transfer ATP-binding protein TraC
Organism
shan  Sphingomonas hankookensis
Brite
KEGG Orthology (KO) [BR:shan00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shan02044]
    PPZ50_17125 (traC)
Secretion system [BR:shan02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   PPZ50_17125 (traC)
SSDB
Motif
Pfam: DUF5934 TraC_F_IV P-loop_TraG AAA_10 DUF87 T4SS-DNA_transf Fer4_NifH CbiA FtsK_SpoIIIE TraG-D_C AAA_22 nSTAND3 TrwB_AAD_bind AAA_16 Mg_chelatase
Other DBs
NCBI-ProteinID: WCP73831
LinkDB
Position
pSZ.B2R2_1:42200..44764
AA seq 854 aa
MAKTGFIARLLGDTRAPDQGTPSHGAPMLSQWLPYRSYDARHDLFYQTDSIAFALELAPL
MGADERTGEIIAQMLSESVPPSARVQLLAFQSPRVGALIAQYALPRYKAGGIHRKIAERR
SAFLRHGAWVSMSKDGPFHVRNHRIFLSVSIRSGKATPEELTGVRDSIVSTLQSIDMPAT
RLKPVDLIALIDDITAPAFDVSDHVSEYSDLDPIADQCVRRDVQTVVQADRLLVSVEPLR
AVTNLSGETQYQEIRPDTFDYRFFSVRNLPNRWAPWDVQKLIGDMFSDKLRPGCPTLTSL
CLCYQDEQAASSKAGYKFMRTSSLADSKSARLLPQLKDQSREWEHVTQELRLGKKLVQAY
YAVGIISPKGQGDANERTVKSMYKAAGWDLLDERFLQIMAFMSCLPMTLGNGLDSDLKRM
KRLRTMLTSTAANMLPIQGEYLGGHLPHLMFIGRRGQPFFWSPFENKAGNHNVAVFGKSG
SGKSVALQELCAAFAGVGAKIIVIDDGRSFEHMAKSLGGNFVEFRLRDGFSLNPFSMIDE
TLVAQDEDYLVDALAMLKSIIGQMGRHIDKLNDTERGLIDRAVNQVWEAKGRGGCVDDVI
EALGSDGSVQGTDLAIAMFPFSGKGTYGSFFTGEASVDMSNALTVFELSDLSSREELRSV
VLTAIMFMSSQTMRRMDRQIPKALLIDEAWQMLRGGSMADFVETYSRTCRKYGASLITAT
QSLNDYYKSEGSLAALENSDWSVILMQKPDTISDFQKHGRFDMDPYTESLLRSLKRNGAE
YSDILIKGPESMAVGRLVLDKYSATLYSSSPQTFADIEHLIELGCSMDEAIERVAFPEEY
RDNPPGEPWVEAAE
NT seq 2565 nt   +upstreamnt  +downstreamnt
atggcgaagaccggcttcatcgcgcgcctgctcggcgatacgcgcgcacccgatcagggc
acgccgtcgcacggtgcgccgatgctgtcgcagtggctgccgtaccgcagctatgacgcg
cggcacgacctgttctaccagaccgacagcatcgcgttcgcgctggaactcgcgccattg
atgggcgcggacgagcgcaccggcgagatcatcgcacagatgctgtccgagagcgtgccc
cccagcgcgcgcgtccagttgctcgccttccagagcccgcgcgtgggcgcgctgatcgcg
caatatgcgctgccgcgctacaaggcgggcggcatccatcgcaagatcgccgagcggcga
tcggcgttcctgcgccacggcgcatgggtgtcgatgtcgaaggacggaccgttccacgtc
cgcaaccatcgcatcttcctgtcggtctcgatccgcagcggcaaggcgacgcccgaggag
ctgaccggcgttcgcgacagcatcgtctcgaccctgcagtcgatcgacatgccggcaacc
cggctgaagccggtcgatctgatcgcgctgatcgacgacatcaccgcgccggcgttcgac
gtctccgaccacgtctcggaatattcggacctcgatccgatcgccgaccagtgcgtgcgg
cgcgacgtccagaccgtcgtccaggccgaccgcctgctggtgtcggtcgagccgctgcgc
gcggtgacgaacctgtcgggcgagacgcagtatcaggagattcggcccgacacgttcgac
tatcgcttcttctcggtcaggaacctgccgaaccgctgggcgccgtgggacgtgcagaag
ctgatcggcgacatgttctccgacaagctgcgtccggggtgcccgacgctcacgtcgctg
tgcctgtgttaccaggacgaacaggccgcctcgtcgaaggccggttacaagttcatgcgc
acgtcgagcctcgcggactcgaagtcggcgcggctgctcccgcagctgaaggaccagagc
cgcgaatgggagcatgtcacccaggaattgcgcctcggcaagaagctggtgcaggcctat
tatgcggtcggcatcatcagcccgaaggggcagggtgacgcaaacgagcgcaccgtcaag
tcgatgtacaaggcggccggttgggacctgctcgacgagcggttcctccagatcatggcg
ttcatgtcgtgcctgccgatgacgctgggcaacgggctcgacagcgacctgaagcgcatg
aagcggctgcgcacgatgctgacctcgaccgcggcgaacatgctgccgatccagggcgag
tatctcggcgggcatctgccgcacctgatgttcatcgggcggcgcggccagcccttcttc
tggtcgccattcgagaacaaggcgggcaaccacaatgtcgcggtgttcggcaagtccggc
tcgggcaagtcggtcgcgctgcaggagttgtgcgcggcgttcgccggcgtgggcgcgaag
atcatcgtgatcgatgacggccgctcgttcgagcatatggccaagagcctgggcggcaac
ttcgtcgagtttcgcctacgcgacgggttcagcctcaatccgttctcgatgatcgacgag
acgctggtggcgcaggacgaggactatctcgtcgacgcgctcgcaatgctcaagtcgatc
atcgggcagatgggccggcacatcgacaagctcaacgacaccgagcgcggcctgatcgac
cgcgcggtcaaccaggtgtgggaggccaagggcaggggagggtgcgtcgacgacgtgatc
gaggcgctcggctccgacggctcggtgcagggcacggatctcgcgattgcgatgttcccg
ttctcgggcaagggcacctacggcagcttcttcaccggcgaggcgtcggtggacatgtcg
aacgcgctgaccgtgttcgagctctcggacctgtcgagccgcgaggaactgcgctcggtc
gtgctgactgcgatcatgttcatgtcgtcgcagacgatgcgccggatggatcgccagatc
cccaaggcgctgctaatcgacgaggcgtggcagatgctgcgcggcgggtcgatggccgat
ttcgtcgagacctacagccgtacctgccgcaaatatggcgcgtcgctcatcaccgcgacg
cagtctctcaacgactattacaagtcggaaggcagccttgcggcgctggagaactccgac
tggtcggtcatcctgatgcagaaacccgacacgatctcggatttccagaagcacggccgc
ttcgacatggacccctacaccgaaagcctgctgcgttccttgaagcgcaacggcgcggaa
tattccgacatcctcatcaaggggccggaatcgatggcggtcgggcggctcgtcctcgat
aaatattcggcgacgctctattcctcgagcccgcagaccttcgccgatatcgagcatctg
atcgagctcggctgctcgatggacgaggcgatcgagcgcgtcgccttccccgaggaatat
cgagacaatcctccgggcgagccctgggtggaggcggcggaatga

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