Sphingomonas hankookensis: PPZ50_17205
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Entry
PPZ50_17205 CDS
T08811
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
shan
Sphingomonas hankookensis
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shan03032
]
PPZ50_17205
03036 Chromosome and associated proteins [BR:
shan03036
]
PPZ50_17205
03400 DNA repair and recombination proteins [BR:
shan03400
]
PPZ50_17205
DNA replication proteins [BR:
shan03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PPZ50_17205
Chromosome and associated proteins [BR:
shan03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PPZ50_17205
DNA repair and recombination proteins [BR:
shan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PPZ50_17205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WCP73846
LinkDB
All DBs
Position
pSZ.B2R2_1:58714..58995
Genome browser
AA seq
93 aa
AA seq
DB search
MTTTSDLAEQISNTHGLAKADARKVIDAILANITAAVATGEEVSLNGFGKFKLKDTPERQ
GRNPSTGEAITIAASRKLTFAPAKAVRDRMNGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgacgactacatccgatctggccgagcagatctccaacacccatggcctcgcaaaggcc
gacgccaggaaagtcatcgatgcgatccttgcgaacatcaccgcggccgtcgcgaccggc
gaggaagtcagcctcaacgggttcggcaagttcaagctgaaggacacccccgagcgtcag
gggcgcaacccatcgacgggcgaggcgatcacgatcgcggcgtcacgcaagctgacgttc
gcgccggcgaaggcggtccgcgatcggatgaacggcaagtga
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integrated database retrieval system
