Shewanella halotolerans: K0H81_00685
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Entry
K0H81_00685 CDS
T09172
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
shao
Shewanella halotolerans
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shao03016
]
K0H81_00685 (trmA)
Enzymes [BR:
shao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
K0H81_00685 (trmA)
Transfer RNA biogenesis [BR:
shao03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
K0H81_00685 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_4
Methyltransf_25
MTS
Methyltransf_15
Methyltransf_31
Methyltransf_11
Cons_hypoth95
TRM5-TYW2_MTfase
PrmA
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QYJ90167
LinkDB
All DBs
Position
complement(147099..148196)
Genome browser
AA seq
365 aa
AA seq
DB search
MNVDAMDPQQYDAQLDVKRQKLAQLFADFETPELEVFASQKAHYRMRAEFRVWHEGEDLY
YYMFDKAQNQKVRCEQFLPASQLINDMMPELMAALRPNPVLRHKLFQVDFLSTLSGEILV
SLLYHKQLDAQWQEEAQALKQALSSKFKVDIIGRARKQKLVMDRDFVIESLPVSGKQLTY
KQVENSFTQPNGEVAIKMLEWAIDITRDSNGDLLELYCGNGNFSIALAQNFNRVLATELA
KPSVDSAQYNIEANQIENLQIIRMSAEDFTDALAKKRSFRRLEGVDLDSYDCNTIFVDPP
RAGLDDNTLSMVQGYERILYISCNPNTLLDNLKVLDKTHKITRFALFDQFPYTDHMESGV
LLERR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagacgcaatggatccccagcaatatgacgcacaacttgatgtgaaacgtcag
aaactagcccagctatttgccgacttcgagacacccgaactggaagtgtttgcctcacag
aaggcccactaccgcatgcgcgccgagtttcgcgtctggcatgagggtgaggatctctac
tattacatgttcgataaggcgcagaaccagaaggttcgctgcgagcagttcttaccggcg
agtcagttgatcaacgacatgatgcccgagctgatggcggcgctgcgtcctaacccagtc
ctgagacacaagctgttccaggtggattttctctctaccctcagcggagagatcttagtg
tcactcctgtatcacaagcagctcgatgcccagtggcaagaggaagctcaggcgctgaaa
caggcactgtcgagcaagtttaaggtggacatcataggccgcgctcgtaagcagaagctg
gtgatggatcgcgacttcgtcatcgaatccctccccgtcagcggcaaacagcttacctac
aagcaggtcgaaaatagctttactcagcctaacggcgaggtggcaatcaagatgctggag
tgggccatcgacatcacccgtgatagtaatggcgatctgttggagctctactgcggcaac
ggtaatttctctatcgccctggcacaaaacttcaaccgtgtgctcgctaccgagctggcc
aagccatcggtggactcggcccagtacaacatagaggccaaccagatagaaaatctgcag
attatccgtatgtcggcggaagactttaccgatgcgctggccaagaagcgtagcttcaga
cgcttagaaggggtggatctggacagctatgactgcaacactatcttcgtcgacccgcca
agagcaggcttagatgacaacacactatctatggtgcagggctacgagcgtattctctat
atctcttgtaatcccaataccctgctggacaacctcaaggtgttggacaagacccataag
atcacccgcttcgcactgttcgaccagttcccctatacagatcatatggaatctggtgtg
ctgctggagcgtcgttaa
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integrated database retrieval system
