Shewanella halotolerans: K0H81_01980
Help
Entry
K0H81_01980 CDS
T09172
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
shao
Shewanella halotolerans
Pathway
shao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K0H81_01980 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shao03400
]
K0H81_01980 (priA)
Enzymes [BR:
shao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K0H81_01980 (priA)
DNA repair and recombination proteins [BR:
shao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0H81_01980 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
WHD_PriA
Zn_ribbon_PriA
AAA_30
TrwB_AAD_bind
AAA_22
DUF2321
AAA_19
DUF5816
Zn_ribbon_6
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
QYJ90396
LinkDB
All DBs
Position
complement(432348..434543)
Genome browser
AA seq
731 aa
AA seq
DB search
MSLFVEVALPVPMRQAFSYRVKEADLDKAQVGVRVRVPFGRQQLIGLVTGLSQSCDLAPN
QIKSVITFLDHEGVLPPSLYKLTQWAARYYFCSLGQMLSQALPVALRKGAEVEAQQLQIW
RVTAAGQEADIDLLKRAPAQRKLLLALLETELSQDELNALELSKTALKALVERGWIECIE
RRIESNLSWRDGLELDETPHQLNPEQAIAVATLNQQQGYHCTLLEGITGSGKTEVYLALL
ETVLKQGKQALILVPEIGLTPQTISRFKRRFKVQVAVIHSGLTDNQRLSAWRLARSGEAA
IIIGTRSALFTPMRYPGIIILDEEHDASFKQQEGIGYHARDLAVMRGHLESVPVLLGSAT
PSLETLQNALSGRYQHLSLGSRAGAAEKVRQGIIDIRNQPLKNGLSHGLLNEMRIHLDAG
NQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCGNQYAIPKQCHQ
CGSTMLMGQGVGTEQLADALAKEFPNYPVVRIDRDTTSRKGALETHLNAIHKGEYKILVG
TQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVSGRAGRARKPGTVLLQT
HQCDNPILRELMHKGYGEFARGQLEERKQALLPPAWHMLLLRAEAHKAQDADAFLAQVAQ
LLPQDEQCEIIGPMPAPMDRKAGKFRRQLMFQTKTRGLLQQAFEQALPQIEALPLAKLCR
WSLDRDPQDLL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtttgtcgaagtcgccctccccgtccccatgcgccaggcctttagctatcgc
gtcaaagaggccgatctcgacaaagctcaggtaggtgtcagggtcagggtacccttcggt
cgacagcaactgatcgggttggtaaccggcctaagccaaagctgcgatctggcgccgaac
cagatcaagtcggttatcaccttcctcgaccatgagggagtattgcccccctcgctatac
aagctgacccaatgggccgcccgctactatttttgcagcctggggcagatgttgtcacag
gccctgccggtcgccctgcgtaagggtgccgaggtagaggcccagcagctacagatctgg
cgcgtgaccgctgccggacaggaagcggatatcgatctgctcaagcgtgcacccgcccag
cgcaagctgctgcttgccctgttagagacagagctcagccaggatgaactcaatgccctg
gagctgagcaagacggcgctaaaggctcttgttgaacggggctggatagagtgtatcgag
cggcgtatcgaatcaaatctcagctggcgcgacgggctcgaactcgatgagacgccccat
cagctcaatcccgagcaggccatcgccgtcgccaccctcaaccaacagcagggctaccac
tgcaccttactcgaggggatcacgggctcgggcaagactgaggtctatctggcactgctg
gaaactgtgcttaaacagggtaaacaggcactgatcctggtgcccgagattggcctgaca
ccccagaccatcagccgcttcaagcgtcgcttcaaggtgcaggtggcggtgatccactct
gggctcaccgacaatcaacgcctgagcgcctggcgtctggctagaagcggcgaggcagcc
atcataatcggcacccgctcggcgctgttcacccccatgcgctatccaggcatcatcatc
ctggatgaggaacacgacgccagcttcaaacagcaagaggggatcggttatcacgcccgg
gacttagccgtgatgcgcggccatctcgaatcggtgcccgtactccttggcagcgccacc
ccctccctggagacgctacagaatgccctgtctggacgctaccaacacctgagcctgggc
agccgcgccggcgccgccgagaaggtgcgccaggggatcatcgacatccgcaatcagccg
ctgaagaatggtctctcccatggcctgctcaacgagatgcgaatccatctggatgcgggc
aatcaggtgctgctgtttcttaaccgccgcggcttcgccccggcgctgctatgtcacgag
tgcggccacctgcacgagtgcgatcgctgcgacgccttcttcactgtgcatcaatccctc
ggcgagatccgttgccaccactgcggcaatcagtacgccatccccaagcagtgccatcag
tgcggcagcaccatgctgatgggccaaggggtgggcacagagcagctggccgacgccctg
gccaaggagtttcccaactaccctgtggtgcgaatcgatcgcgacaccaccagccgcaag
ggagcgctggaaacccaccttaacgccatccataagggggaatataagatcttggtcggc
acccagatgctcgccaaggggcaccatttccccgacgtcaccctggtcggcctgttagat
gtcgatggcgccctgttcagcgcagactttcgcgcccccgagcgtttcggtcaactctat
actcaggtatcgggccgcgccggacgagcgcgcaagccgggcacagtgctgcttcagacc
caccaatgtgacaaccccatactgagggagctgatgcacaagggctatggcgagttcgcc
cgcggtcagctggaggagcgtaaacaggccctgttgccgccggcctggcacatgttgctg
ctacgcgccgaggcccacaaggcacaggacgccgatgccttcctggcccaggttgcccag
ttactgccgcaagacgagcagtgcgagatcataggccccatgcccgctcccatggacaga
aaggccggcaaattccgccgtcagctgatgttccagaccaagacccgcgggctgttgcag
caggccttcgagcaggcactgccgcagatcgaagccctgccactggccaagctatgccgc
tggagcctagatcgcgacccgcaggatctcctgtga
DBGET
integrated database retrieval system
