Shewanella halotolerans: K0H81_02235
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Entry
K0H81_02235 CDS
T09172
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
shao
Shewanella halotolerans
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shao03032
]
K0H81_02235
03036 Chromosome and associated proteins [BR:
shao03036
]
K0H81_02235
03400 DNA repair and recombination proteins [BR:
shao03400
]
K0H81_02235
DNA replication proteins [BR:
shao03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K0H81_02235
Chromosome and associated proteins [BR:
shao03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
K0H81_02235
DNA repair and recombination proteins [BR:
shao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
K0H81_02235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_euk_1
HU-CCDC81_bac_2
NA37
Motif
Other DBs
NCBI-ProteinID:
QYJ90444
LinkDB
All DBs
Position
complement(487643..487915)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELVAKIAESAELTKAEAARALKSFEETVAEAMKNGEKISIVGFGSFETTSRAARTG
RNPQTGKEIQIPAAVVPKFKAGKTLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaactgaacttgttgcaaaaatagcggaaagcgctgaactcactaaagctgaa
gctgctcgcgccttaaagtctttcgaagaaacggtagcggaagcgatgaagaacggcgaa
aaaatctctattgtaggttttggttctttcgagaccactagccgtgcagcacgtacaggc
cgcaacccacagacgggcaaagaaattcagatcccagcggctgtagtacctaagtttaaa
gccggtaagacgctaaaagacagcgtaaactaa
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