Shewanella halotolerans: K0H81_02745
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Entry
K0H81_02745 CDS
T09172
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
shao
Shewanella halotolerans
Pathway
shao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K0H81_02745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shao03019
]
K0H81_02745
03009 Ribosome biogenesis [BR:
shao03009
]
K0H81_02745
Enzymes [BR:
shao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K0H81_02745
Messenger RNA biogenesis [BR:
shao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K0H81_02745
Ribosome biogenesis [BR:
shao03009
]
Prokaryotic type
rRNA helicases
K0H81_02745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QYJ90538
LinkDB
All DBs
Position
complement(608468..610267)
Genome browser
AA seq
599 aa
AA seq
DB search
MSSSEKTFRELGLSEPLLRALDELGYEKPTPIQAASIDPLMAGKDILGQAQTGTGKTGAF
ALPLLNAIDPNRNVPQILVLAPTRELAVQVAEAFGSYSKFMKGLHVLPIYGGQSMHQQLN
ALRRGPQIVVGTPGRVMDHMRRGTLKLETLNALVLDEADEMLKMGFIDDIEWILEHTPQE
RQLALFSATMPEQIKRVANKYLQTPEHISIAASHTTVESIEQRFVQVSQHNKLEALVRVL
EVENTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVDQLKRGKLDILI
ATDVAARGLDVERIGHVINYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTHREMRMLRTI
ERATKSRISPMNVPSPETVAERRLSRLGEQVSNTIDNESLDFMHGAVAQLCQQLEVDTEV
LAAALLNMVQQERPLQLPPIQERQRDSRDERNSRDRGERSDRAPRGRRESRPTPTNLGQA
DTLKDHPDVKMCRYVLDVGRDHGVGVGNIVGAVANEANIDSRYIGQIQLFDQITSIDLPE
GMPKDVLQHLKKVRVCGKPLNIREAGSEMVNASDDNRAPRRRKPVGERKSHRKGNRDNG
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccagtgaaaaaactttccgcgaactcggcctgtccgagcctttgttgcgtgct
ctcgacgagctaggttatgaaaaacctacgccgatccaggccgccagtatcgaccccctc
atggcgggtaaagatattctaggccaggcgcaaaccggtacgggtaaaaccggtgccttt
gccctgcccctgctcaacgctatcgatcctaatcgcaacgtgccacaaattctggtactg
gcaccgacccgcgaactggcggtacaggttgccgaagccttcggtagctactccaaattt
atgaaaggcctgcacgtactgcctatctacggcggtcagagcatgcatcaacagcttaac
gccctgcgtcgtggcccacagatcgtcgtgggtacaccaggccgtgtcatggaccatatg
cgtcgtggcacccttaagctagagacactcaacgccttggtactcgatgaggccgacgaa
atgctcaagatgggctttatcgacgacatcgaatggatcctggaacacacgccacaggag
cgtcaactggcactcttctcggccaccatgcctgagcagatcaagcgcgtcgccaacaag
tacctgcaaacgccggaacacatcagcatcgccgcaagccacaccacggttgagtctatc
gagcagcgtttcgtgcaggtgtctcagcacaacaaactcgaggctctggtacgcgtactg
gaagtggaaaacaccgaaggtatcatcatcttcgtacgtacccgtaactcttgtgttgag
ctggccgagaagcttgaagcccgtggttatgcctcatcgccactgcatggcgacatgaac
caacaggcccgtgagcgcgccgtcgatcagcttaagcgtggcaagctggatattctgatc
gccaccgacgtggcagcccgtggtctggacgttgagcgtatcggtcacgtgatcaactat
gatatcccctacgacaccgaagcctacgtacaccgtatcggtcgtaccggccgcgccggt
cgtaccggtatggcgattctgttcgtcacccacagagagatgcgcatgctgcgtaccatt
gagcgtgcgaccaagagccgtatctcgccgatgaacgtgccaagccctgagacagtggcc
gagcgtcgtctgtcgcgtctgggtgagcaggtatctaacaccatcgacaacgaatccctg
gacttcatgcatggcgccgtcgcccaactgtgtcagcaactggaagtggacacagaagtg
cttgcggccgcgctgttgaacatggttcagcaggagcgtcctctgcaactgcctcctatc
caggagcgtcagcgcgatagccgtgacgagcgcaactcgcgtgaccgtggtgaacgctca
gatcgtgctcctcgcggccgccgcgaatcgcgtccgaccccgacaaacctgggccaggcc
gataccctgaaagatcatccagacgtcaagatgtgccgttacgtgctagacgtgggtcgt
gaccatggtgtgggtgtaggcaacatcgtcggcgccgtcgctaacgaagccaacatcgac
agccgctacataggccagatccaactgttcgatcagatcacctcgatcgatctgccagaa
ggcatgccaaaggatgtcctgcaacacctgaagaaggtacgcgtatgtggtaagccacta
aacatccgtgaagcgggcagtgaaatggtcaacgccagcgatgacaaccgagcaccacgt
cgtcgcaagcctgtgggtgagcgcaagtcacaccgcaagggcaacagagacaacggctaa
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