Shewanella halotolerans: K0H81_04210
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Entry
K0H81_04210 CDS
T09172
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shao
Shewanella halotolerans
Pathway
shao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0H81_04210 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shao03400
]
K0H81_04210 (ung)
Enzymes [BR:
shao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K0H81_04210 (ung)
DNA repair and recombination proteins [BR:
shao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K0H81_04210 (ung)
Prokaryotic type
K0H81_04210 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QYJ90811
LinkDB
All DBs
Position
943577..944245
Genome browser
AA seq
222 aa
AA seq
DB search
MTEISQWQDFIDQEAKQAYFGRLQAFVQGERDAGKAIYPQEGQVFSAFELTPLDKVRVVL
IGQDPYHGEGQAHGLCFSVQPGVKVPPSLVNMYKELANDIDGFEIPDHGYLAKWADQGVL
MLNTVLTVEQGKAHSHAKAGWETFTDNALRLLNGQERPIIFVLWGGHAIKKSKLIEADQH
HLVSGPHPSPLSAYRGFFGCKHFSKINELLMASGETPIDWQV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgacagagatcagccaatggcaagattttatcgaccaggaggccaagcaagcctacttt
ggccggttgcaggctttcgtgcaaggtgagcgcgatgccggtaaggcgatctatccgcaa
gaggggcaggtgtttagcgccttcgagctaacgccgctggataaggtgagggtggtgttg
attggtcaagacccttatcacggcgaaggccaggcgcacggtctctgcttctcggtacag
cccggggtgaaggtgccgccatctttggtgaacatgtataaggagctggccaacgatatc
gacggctttgagatccctgaccatggttatctggccaagtgggcagatcagggcgtcttg
atgctcaatactgtactcacggtggaacagggcaaggcgcactctcatgccaaggcgggg
tgggagacctttaccgacaacgccttaaggctgcttaatgggcaggagcgcccgattatt
ttcgtgctgtggggcggtcacgccataaagaagagcaagcttatcgaggcggaccagcat
catctggtgagcgggcctcacccttcaccactctctgcctaccgtggtttctttggttgt
aaacacttctcaaaaatcaatgagttgttaatggcatctggcgagacacctatcgactgg
caggtataa
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